Overview

This repository contains all files needed to reproduce the results presented in the paper Improving Deconvolution Methods in Biology through Open Innovation Competitions: An Application to the Connectivity Map Andrea Blasco, Ted Natoli, Michael G. Endres, Rinat A. Sergeev, Steven Randazzo, Jin H. Paik, N. J. Maximilian Macaluso, Rajiv Narayan, Xiaodong Lu, David Peck, Karim R. Lakhani, Aravind Subramanian; bioRxiv 2020.01.10.897363; doi: https://doi.org/10.1101/2020.01.10.897363

• The data/ folder contains all the data files
• The analysis/ folder contains all R scripts needed to reproduce all the figures and tables
• contestant_writeups/ folder contains verbal description of the winning algorithms as submitted by the competitors