Fix the packaging version conflict #200
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| name: Build and Deploy | |
| on: | |
| push: | |
| branches: | |
| - main | |
| jobs: | |
| build: | |
| permissions: | |
| contents: write | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout the repository | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12.1' | |
| - name: Install the dependencies | |
| run: | | |
| python -m pip install -r requirements.txt | |
| - name: Check the Pyodide version | |
| run: | | |
| echo "PYODIDE_SHA_SHORT=$(git submodule status pyodide | cut -c 2-8)" >> $GITHUB_ENV | |
| - name: Cache the Pyodide build | |
| uses: actions/cache@v4 | |
| with: | |
| path: ./pyodide | |
| key: pyodide-${{ github.ref }}-${{ env.PYODIDE_SHA_SHORT }} | |
| restore-keys: | | |
| pyodide-${{ github.ref }}-${{ env.PYODIDE_SHA_SHORT }} | |
| pyodide-${{ github.ref }} | |
| pyodide-refs/heads/main | |
| - name: Ensure Pyodide source files are fresh | |
| run: | | |
| cd pyodide | |
| git status | |
| git diff --name-only | xargs git checkout -- | |
| - name: Cache the Pyodide Docker image | |
| uses: ScribeMD/[email protected] | |
| with: | |
| key: docker-pyodide-${{ hashFiles('pyodide/Dockerfile') }} | |
| - name: Discover the cached Pyodide Docker image | |
| run: echo "PYODIDE_DOCKER_IMAGE=$(docker images climet-eu/pyodide --format '{{.ID}}')" >> $GITHUB_ENV | |
| - name: Build the Pyodide Docker image | |
| if: ${{ env.PYODIDE_DOCKER_IMAGE == '' }} | |
| run: | | |
| cd pyodide | |
| docker build -t climet-eu/pyodide . | |
| echo "PYODIDE_DOCKER_IMAGE=$(docker build . -q)" >> $GITHUB_ENV | |
| - name: Build Pyodide and all required packages | |
| run: | | |
| cd pyodide | |
| ./run_docker \ | |
| --non-interactive \ | |
| PYODIDE_PACKAGES="aiohttp,basemap,cdsapi,cfgrib,cf-units,cmcrameri,dask,earthkit,ecmwf-api-client,ecmwf-opendata,field-compression-benchmark,fsspec,git2,gribscan,h5netcdf,intake,ipyfilite,ipython,kerchunk,lzma,matplotlib,MetPy,netcdf4,numcodecs,numpy,pandas,pint,proplot,requests,scipy,sympy,s3fs,xarray,xeofs,zarr" \ | |
| make | |
| - name: Extract the requirements.txt file | |
| run: python tools/requirements.py | |
| - name: Clean up the pyodide build | |
| run: | | |
| cd pyodide | |
| find . -name jupyter-lite.json -delete | |
| find . -name jupyter_lite_config.json -delete | |
| mkdir -p packages/numpy/build | |
| touch packages/numpy/build/ls-success | |
| ls -d packages/*/build/* | xargs rm -r | |
| - name: Check the validity of the requirements.txt file | |
| run: | | |
| python -m venv venv | |
| source venv/bin/activate | |
| python -m pip install -r files/requirements.txt --dry-run --ignore-installed || echo "failed" | |
| deactivate | |
| rm -rf venv | |
| - name: Build the JupyterLite site | |
| run: | | |
| rm -f files/README.md && cp ./README.md files/ | |
| mkdir -p static | |
| cp -r pyodide/dist static/pyodide | |
| rm -rf static/pyodide/*-tests.tar | |
| rm -f static/pyodide/tsconfig.tsbuildinfo | |
| jupyter lite build --output-dir dist | |
| cp ./_headers dist/ | |
| cp -r data dist/ | |
| cp static/favicons/favicon.ico dist/ | |
| find dist/ -name favicon.ico | xargs -L1 cp -f static/favicons/favicon.ico | |
| rm -rf static | |
| - name: Deploy to dist branch | |
| uses: peaceiris/actions-gh-pages@v4 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| publish_branch: dist | |
| publish_dir: ./dist | |
| force_orphan: true |