Skip to content

Issues: chrishah/MITObim

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

32 Open 22 Closed
32 Open 22 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Link to docker image seems broken
#60 opened Aug 28, 2024 by Kroh-N
% of mtDNA reads of the total sequence reads that mapped to the whole mtDNA in MITObim, read pairs or reads
#59 opened Feb 13, 2024 by AliBasuony2022
2
running on a batch of samples
#58 opened Feb 7, 2024 by bwprice
#final assemly result#
#57 opened Jan 29, 2024 by AliBasuony2022
2
% of mtDNA reads of the total sequence reads that mapped to the whole mtDNA in MITObim
#56 opened Jan 1, 2024 by AliBasuony2022
3
View final assembly result
#55 opened Oct 14, 2023 by luckyyuyu
Does MITObim bias gene order?
#54 opened Mar 23, 2023 by liamfriar
Can I use MITObim with Nanopore reads?
#53 opened Jun 14, 2021 by hungweichen0327
2
CCS HiFi reads
#52 opened Mar 24, 2021 by DieTANG
Can't exec "mirabait": Permission denied
#51 opened Mar 22, 2021 by desmodus1984
1
MITObim tutorial 3 reference length
#48 opened Oct 19, 2020 by imperioso94
Bugs for MITObim?
#47 opened Aug 9, 2020 by cliu6688
using the interleave-fastqgz-MITOBIM.py
#46 opened Jun 2, 2020 by Niloofar-Alaei
1
MITObim usage
#45 opened May 28, 2020 by marco91sol
1
mt-it12_noIUPAC.fasta
#44 opened Dec 18, 2019 by jhcaddisfly
1
Creating a MITObim recipe for Bioconda
#43 opened Dec 17, 2019 by gavieira
1
Mira paramters
#42 opened Dec 12, 2019 by jhcaddisfly
multiple seeds
#40 opened Oct 25, 2019 by sghignone
2
Use of uninitialized value $readpool in -e
#39 opened Mar 26, 2019 by nsmt89
5
problem with - v
#38 opened Feb 15, 2019 by Ferxengutta
1
iteration file size
#37 opened Nov 20, 2018 by ghost
3
quick option error: no reads with reasonable match
#36 opened Nov 6, 2018 by jullee
7
The program stops at interation1
#35 opened Oct 27, 2018 by kataksk
4
MIRA failed during mapping assembly
#31 opened Jan 13, 2018 by ghost
Error: your read pool doesnot contain any read
#30 opened Oct 13, 2017 by ank1211
ProTip! Adding no:label will show everything without a label.