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Merge pull request #30 from druvus/shebang-fix
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Change shebang to #! /usr/bin/env perl
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singing-scientist authored Mar 27, 2020
2 parents c72f4f0 + b1e895f commit 9d0ffc2
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2 changes: 1 addition & 1 deletion fasta2revcom.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

# Creates reverse complement versions of all 3 SNPGenie input files.

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2 changes: 1 addition & 1 deletion gtf2revcom.pl
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@@ -1,4 +1,4 @@
#! /usr/bin/perl
#!/usr/bin/env perl

# Creates reverse complement versions of all 3 SNPGenie input files.

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2 changes: 1 addition & 1 deletion snpgenie.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

# PROGRAM: SNPGenie is a Perl program that calculates dN/dS, piN/piS, and gene diversity
# from NGS SNP Reports generated from pooled DNA samples.
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4 changes: 2 additions & 2 deletions snpgenie_between_group.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

# PROGRAM: SNPGenie, between-group analysis, for two or more aligned multi-FASTA files.

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"\n## Please find results in the working directory. ##\n".
"################################################################################".
"\n\n\n";
}
}
2 changes: 1 addition & 1 deletion snpgenie_between_group_processor.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

#AMNH-HUXLEY-PBS is #! /usr/local/software/PERL/perl-5.26.0/bin/perl
#NYU-PRINCE-SLURM is #! /share/apps/perl/5.24.0/intel/bin/perl
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4 changes: 2 additions & 2 deletions snpgenie_within_group.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

# PROGRAM: SNPGenie for within-group analysis is a Perl program that calculates dN/dS,
# piN/piS, and gene diversity for a single aligned FASTA file, with accompanying CDS
Expand Down Expand Up @@ -18010,4 +18010,4 @@ sub end_the_program {
"\n## Please find results in the working directory. ##\n".
"################################################################################".
"\n\n\n";
}
}
2 changes: 1 addition & 1 deletion snpgenie_within_group_processor.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

# PREVIOUSLY snpgenie_sw.pl

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2 changes: 1 addition & 1 deletion vcf2revcom.pl
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#! /usr/bin/perl
#!/usr/bin/env perl

# Creates reverse complement versions of all 3 SNPGenie input files.

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