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v1.9.1

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@bkmartinjr bkmartinjr released this 13 Dec 17:55
· 236 commits to main since this release
7bc5c12

Changes

Minor updates in preparation for releasing December LTS Census and contributed embeddings.

Deprecations

  • [python] cellxgene_census.experimental.util.X_sparse_iter is deprecated and will be removed in a future release. Please use the new SOMA blockwise iterators available on the SparseNDMatrix class.

What's Changed

  • [builder] Update release cleanup code to support relative URIs by @ebezzi in #888
  • [python] Geneformer WDL: pin TileDB and Census versions by @mlin in #889
  • [misc] contrib embedding curation fixes by @bkmartinjr in #890
  • [r] Update R docs in preparation for API release 1.9.1 by @pablo-gar in #893

Full Changelog: v1.9.0...v1.9.1