release the version 1.0 of KK4D

Full Changelog: V0.05...V1.0

1. Fixed a bug where consistent input and output file names can cause program errors
2. Added script genome2cdspep.sh to retrieve KK4D input file from genome file
3. Added script check to check if dependent applications are installed correctly_ ENV.sh
4. Fixed some issues in the drawing script and modified Visual/drawKaKs4DTv The R script can add a new parameter at the end to control the nucleic acid mutation rate, with a default value of 7E-9
5. Added a main command 'KK4D. sh init' to automatically create a config.ini file in the current directory.
6. Added sample data to the example page, which can be accessed from the KK4D homepage https://chaimol.com/product/KK4D/ View. Simultaneously modified the style of the homepage.

release the V0.05

This is a release for V0.05. Except for readme, all files are the same as V0.04debug.

repair an bug

The problem with the previous version is that when the number of chromosomes is specified, the data of the first n chromosomes is extracted, and the longest chromosome is not automatically extracted. After this repair, the longest top n chromosomes can be automatically extracted for analysis.

publish the version of V0.04

This is the package file of the latest version of KK4D, which mainly updates the visualization module.
At the same time, the way of providing parameters is optimized, which can support running multiple KK4D.sh at the same time without conda. But you need to specify a different working path, otherwise some files with the same name in the visualization result will be overwritten.

publish the version of V0.0.2.1

repair the error of "Checking KaKs_Calculator: KaKs_Calculator is not accessible. " This version is a repair version.
The main version is Vx.x.x, and the Vx.x.x.x is the main version repaired.

publish the version of V0.0.2

Last release do not upload all file to github.so this is the Version 0.02. Add the Chinese Usage file.