tracer-utils

Scripts

This repository contains scripts for running the Teichlab/tracer package.

bsub-tracer-assemble.sh - submits tracer assemble to be executed on the farm (do first)

bsub-tracer-summarise.sh - submits tracer summarise to be executed on the farm (do second)

Dockerfile

To build a working singularity image for tracer, ensure your environment has docker and singularity installed. Then do the following:

1. git clone https://github.com/SimonDMurray/tracer.git (this pull request is yet to be merged)
2. cd tracer
3. docker build -t tracer:v0.6 .
4. sudo singularity build tracer_v0.6.sif docker-daemon://tracer:v0.6