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Merge pull request #7 from cellgeni/refactor_metadata_pulling #14

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Merge pull request #7 from cellgeni/refactor_metadata_pulling

Merge pull request #7 from cellgeni/refactor_metadata_pulling #14

Triggered via push January 27, 2025 12:57
@apredeusapredeus
pushed b80355c
main
Status Failure
Total duration 41s
Artifacts –

test.yml

on: push
Matrix: test
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11 errors and 4 warnings
Test GSE191067: No ENA metadata
Process completed with exit code 1.
Test E-MTAB-9221: Regular ENA dataset
The job was canceled because "GSE191067_No_ENA_metadata" failed.
Test E-MTAB-9221: Regular ENA dataset
The operation was canceled.
Test GSE250130: No Project or SubProjects in soft_family file
The job was canceled because "GSE191067_No_ENA_metadata" failed.
Test GSE250130: No Project or SubProjects in soft_family file
The operation was canceled.
Test GSE111360: Subset list provided
The job was canceled because "GSE191067_No_ENA_metadata" failed.
Test GSE111360: Subset list provided
The operation was canceled.
Test PRJNA511433: Regular GEO dataset but using BioProject
The job was canceled because "GSE191067_No_ENA_metadata" failed.
Test PRJNA511433: Regular GEO dataset but using BioProject
The operation was canceled.
Test GSE264508: .fastq and .sra files in ENA metadata
The job was canceled because "GSE191067_No_ENA_metadata" failed.
Test GSE264508: .fastq and .sra files in ENA metadata
The operation was canceled.
Test GSE117988: Crap .fastq files, but .sra files are available in ENA metadata
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test GSE274955: Broken .sra files. Files in .bam format available
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test GSE160513: Regular GEO dataset
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Test GSE191067: No ENA metadata
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636