🐛 added data to start

DESCRIPTION

@@ -1,55 +1,52 @@
-Package: movedesign
-Title: Study design of movement ecology studies
-Version: 0.0.0.9001
-Authors@R: person('In\u00EAs', 'Silva', email = '[email protected]', role = c('cre', 'aut'))
-Description: A shiny app to design movement ecology studies.
-License: MIT + file LICENSE
-URL: https://ecoisilva.github.io/movedesign/
-Depends: 
-    R (>= 3.5.0)
-Imports: 
-    bsplus,
-    config (>= 0.3.1),
-    crayon,
-    ctmm (>= 0.6.1),
-    dplyr,
-    DT,
-    data.table,
-    fontawesome,
-    ggiraph,
-    ggplot2,
-    golem (>= 0.3.2),
-    mapboxer,
-    minpack.lm,
-    pkgload,
-    plyr,
-    reactable,
-    rintrojs,
-    scales,
-    shiny (>= 1.7.1),
-    shinyalert,
-    shinycssloaders,
-    shinydashboard,
-    shinydashboardPlus,
-    shinyFeedback,
-    shinybusy,
-    shinyjs,
-    shinyWidgets,
-    sparkline,
-    stats,
-    stringr,
-    utils,
-    viridis,
-    waiter
-Suggests: 
-    covr,
-    knitr,
-    rmarkdown,
-    testthat (>= 3.0.0),
-    shinytest2
-VignetteBuilder: 
-    knitr
-Config/testthat/edition: 3
-Encoding: UTF-8
-LazyData: true
-RoxygenNote: 7.2.1
+Package: movedesign
+Title: Study design of movement ecology studies
+Version: 0.0.9002
+Authors@R: person('In\u00EAs', 'Silva', email = '[email protected]', role = c('cre', 'aut'))
+Description: A shiny app to design movement ecology studies.
+License: MIT + file LICENSE
+URL: https://ecoisilva.github.io/movedesign/
+Depends: 
+    R (>= 3.5.0)
+Imports: 
+    bayestestR,
+    bsplus,
+    config (>= 0.3.1),
+    crayon,
+    ctmm (>= 0.6.1),
+    dplyr,
+    data.table,
+    fontawesome,
+    ggiraph,
+    ggplot2,
+    golem (>= 0.3.2),
+    minpack.lm,
+    pkgload,
+    plyr,
+    reactable,
+    rintrojs,
+    scales,
+    shiny (>= 1.7.1),
+    shinyalert,
+    shinycssloaders,
+    shinydashboard,
+    shinydashboardPlus,
+    shinyFeedback,
+    shinybusy,
+    shinyjs,
+    shinyWidgets,
+    stats,
+    stringr,
+    utils,
+    viridis
+Suggests: 
+    covr,
+    knitr,
+    rmarkdown,
+    testthat (>= 3.0.0),
+    shinytest2
+VignetteBuilder: 
+    knitr
+Config/testthat/edition: 3
+Encoding: UTF-8
+LazyData: true
+RoxygenNote: 7.2.1

R/app_server.R

@@ -169,8 +169,8 @@ app_server <- function(input, output, session) {
   # Misc: -----------------------------------------------------------------
 
   # Data viz:
-  mod_comp_viz_server("comp_viz_uploaded", vals = vals) # data_upload
-  mod_comp_viz_server("comp_viz_selected", vals = vals) # data_select
+  mod_comp_viz_server("comp_viz_uploaded", vals = vals) # Uploaded
+  mod_comp_viz_server("comp_viz_selected", vals = vals) # Selected
 
   # Header and control tabs:
   mod_comp_settings_server("comp_settings_1", vals = vals)
@@ -192,9 +192,10 @@ app_server <- function(input, output, session) {
 
     message("Session stopped")
 
-    # if(is.null(movmods)) {
-    #   rm("movmods", envir = .GlobalEnv) }
-    # print(ls(envir = .GlobalEnv))
+    if(!is.null(gps_fixrate)) rm("gps_fixrate", envir = .GlobalEnv)
+    if(!is.null(sims_hrange)) rm("sims_hrange", envir = .GlobalEnv)
+    if(!is.null(sims_speed)) rm("sims_speed", envir = .GlobalEnv)
+    print(ls(envir = .GlobalEnv))
 
   }) # end of onStop
 

R/app_ui.R

@@ -197,8 +197,7 @@ golem_add_external_resources <- function() {
     ),
 
     shinyFeedback::useShinyFeedback(),
-    shinybrowser::detect(),
-
+
     # Activate tooltips and popovers:
     bsplus::use_bs_tooltip(),
     bsplus::use_bs_popover(),

R/mod_comp_viz.R

@@ -54,12 +54,6 @@ mod_comp_viz_ui <- function(id) {
 
         div(class = "col-xs-12 col-sm-12 col-md-12 col-lg-6",
             reactable::reactableOutput(ns("dataTable_id")),
-            # DT::dataTableOutput(ns("dataTable_id")) %>%
-            #   shinycssloaders::withSpinner(
-            #     type = getOption("spinner.type", default = 7),
-            #     color = getOption("spinner.color",
-            #                       default = "#f4f4f4")),
-
             uiOutput(ns("dataTable_showVars"))
         )
 

R/mod_tab_device.R

@@ -824,8 +824,6 @@ mod_tab_device_server <- function(id, vals) {
       req(vals$active_tab == 'regime',
           input$device_type == 1)
 
-      # utils::data(gps_fixrate, package = "movedesign")
-
       fixrate <- movedesign::gps_fixrate
       maxrate_choices <- fixrate %>%
         dplyr::filter(choices == "Y") %>%

R/mod_tab_hrange.R

@@ -1049,8 +1049,6 @@ mod_tab_hrange_server <- function(id, vals) {
 
       output$hrInfo_dti <- shiny::renderUI({
 
-        print("output$hrInfo_dti")
-        print(vals$dti0_units)
         dti <- as.numeric(sumdat[grep('sampling interval', nms)])
         out <- fix_unit(dti, vals$dti0_units)
 

R/mod_tab_report.R

@@ -586,7 +586,7 @@ mod_tab_report_server <- function(id, vals) {
       input_taup <- "days" %#% vals$tau_p0 %#% vals$tau_p0_units
       input_dur <- "days" %#% vals$reg$dur %#% vals$reg$dur_unit
 
-      dat <- sims_hrange[[1]] %>%
+      dat <- movedesign::sims_hrange[[1]] %>%
         dplyr::mutate(tau_p = round("days" %#% tau_p, 1)) %>%
         dplyr::mutate(duration = round("days" %#% duration, 1))
 
@@ -614,7 +614,7 @@ mod_tab_report_server <- function(id, vals) {
       input_dur <- "days" %#% vals$reg$dur %#% vals$reg$dur_unit
       input_dti <- vals$reg$dti %#% vals$reg$dti_unit
 
-      dat <- sims_speed[[1]] %>%
+      dat <- movedesign::sims_speed[[1]] %>%
         dplyr::mutate(dur = round("days" %#% dur, 0))
 
       index_tauv <- which.min(abs(dat$tau_v - input_tauv))
@@ -643,7 +643,7 @@ mod_tab_report_server <- function(id, vals) {
 
       input_taup <- "days" %#% vals$tau_p0 %#% vals$tau_p0_units
 
-      dat <- sims_hrange[[1]] %>%
+      dat <- movedesign::sims_hrange[[1]] %>%
         dplyr::mutate(tau_p = round("days" %#% tau_p, 1)) %>%
         dplyr::mutate(duration = round("days" %#% duration, 1))
 
@@ -668,11 +668,11 @@ mod_tab_report_server <- function(id, vals) {
 
       input_tauv <- vals$tau_v0 %#% vals$tau_v0_units
 
-      dat <- sims_speed[[1]]
+      dat <- movedesign::sims_speed[[1]]
       index_tauv <- which.min(abs(dat$tau_v - input_tauv))
 
       out_tauv <- dat$tau_v[index_tauv]
-      opts <- sims_speed[[1]] %>%
+      opts <- movedesign::sims_speed[[1]] %>%
         dplyr::select(dti, dti_notes) %>%
         unique()
       out_dti <- fix_unit(opts$dti[match(input$highlight_dti,
@@ -1040,7 +1040,7 @@ mod_tab_report_server <- function(id, vals) {
           if (!is.na(as.numeric(input$highlight_dur))) reveal_if <- TRUE
         }
 
-        dat <- sims_hrange[[1]] %>%
+        dat <- movedesign::sims_hrange[[1]] %>%
           dplyr::mutate(tau_p = round("days" %#% tau_p, 1)) %>%
           dplyr::mutate(duration = round("days" %#% duration, 1))
 
@@ -1428,7 +1428,7 @@ mod_tab_report_server <- function(id, vals) {
 
       output$plot_hr_error <- ggiraph::renderGirafe({
 
-        dat <- sims_hrange[[2]] %>%
+        dat <- movedesign::sims_hrange[[2]] %>%
           dplyr::mutate(tau_p = round("days" %#% tau_p, 1)) %>%
           dplyr::mutate(duration = round("days" %#% duration, 1))
         dat$id <- 1:nrow(dat)