Skip to content

Commit

Permalink
Update setup.md
Browse files Browse the repository at this point in the history
  • Loading branch information
ggrimes authored Nov 26, 2021
1 parent 2e90812 commit 688c5f2
Showing 1 changed file with 9 additions and 0 deletions.
9 changes: 9 additions & 0 deletions setup.md
Original file line number Diff line number Diff line change
Expand Up @@ -29,6 +29,8 @@ The simplest way to install the software for this course is using conda.

To install conda see [here](https://carpentries-incubator.github.io/introduction-to-conda-for-data-scientists/setup/).



To create the training environment run:

~~~
Expand All @@ -43,6 +45,13 @@ conda activate nf-training
~~~
{: .language-bash}

## Training scripts

The scripts mentioned in the episodes can be found in the respective episode folders on the github repository.

https://github.com/carpentries-incubator/workflows-nextflow/tree/gh-pages/files/scripts


### Data

Inside the `nf-training` folder download the workshop dataset from Figshare, https://figshare.com/articles/dataset/RNA-seq_training_dataset/14822481
Expand Down

0 comments on commit 688c5f2

Please sign in to comment.