Merge branch 'master' of https://github.com/pmbb-ibi/carnival

.github/workflows/carnival_ci.yml

@@ -0,0 +1,23 @@
+name: Carnival CI
+
+on:
+  push:
+  workflow_dispatch:
+
+jobs:
+  test_runner:
+    runs-on: ubuntu-18.04
+
+    steps:
+    - uses: actions/checkout@v2
+
+    - name: Build testing container
+      run: docker-compose -f ./docker-compose-test.yml build -m 8g
+
+    - name: Run tests and publish coverage results
+      run: |
+        docker-compose -f docker-compose-test.yml run -e COVERALLS_REPO_TOKEN -w /appsrc/app app gradle test coveralls --console=plain --continue -Dtest.http=false
+      env:
+       COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }}
+
+

README.md

@@ -1,5 +1,5 @@
 [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://github.com/pennbiobank/pennai/carnival-public/master/LICENSE)
-[![Build Status](https://travis-ci.org/pmbb-ibi/carnival.svg?branch=master)](https://travis-ci.org/pmbb-ibi/carnival)
+[![Carnival CI](https://github.com/pmbb-ibi/carnival/actions/workflows/carnival_ci.yml/badge.svg)](https://github.com/pmbb-ibi/carnival/actions/workflows/carnival_ci.yml)
 <a href='https://coveralls.io/github/pmbb-ibi/carnival?branch=master'><img src='https://coveralls.io/repos/github/pmbb-ibi/carnival/badge.svg?branch=master' alt='Coverage Status' /></a>
 
 # Carnival
@@ -24,7 +24,7 @@
 
 ## <a name="overview"></a> Overview
 
-Carnval uses objects called _vines_ to connect to external data sources and _reapers_ encode the domain knowledge specific to that data source. Vines can connect to sources such as MySql or Oracle databases, RedCap projects, and CSV files. Some vine features include:
+Carnival uses objects called _vines_ to connect to external data sources and _reapers_ encode the domain knowledge specific to that data source. Vines can connect to sources such as MySql or Oracle databases, RedCap projects, and CSV files. Some vine features include:
 
 -   Parameterized SQL queries
 -   Utilities to compose iterative SQL from lists of identifiers and codes

app/build.gradle

@@ -30,7 +30,7 @@ plugins {
 
     // code coverage
     id 'jacoco'
-    id 'com.github.kt3k.coveralls' version '2.6.3'
+    id 'com.github.kt3k.coveralls' version '2.12.0'
 }