PD-2997: Add tests for Slide-Tags pipeline #1585

aawdeh · 2025-05-06T15:43:33Z

Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP team by tagging @broadinstitute/warp-admins in a comment on this PR.

Did you add inputs, outputs, or tasks to a workflow?
Did you modify, delete or move: file paths, file names, input names, output names, or task names?
If you made a changelog update, did you update the pipeline version number?

github-actions · 2025-05-06T15:43:48Z

Remember to squash merge!

github-actions · 2025-05-06T15:43:59Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-06T15:43:59Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-07T14:46:45Z

Remember to squash merge!

github-actions · 2025-05-07T14:46:55Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-07T14:46:57Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

…e/warp into aa-slidetags-tests

github-actions · 2025-05-07T14:50:18Z

Remember to squash merge!

github-actions · 2025-05-07T14:50:28Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-07T14:50:30Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-07T17:09:29Z

Remember to squash merge!

github-actions · 2025-05-07T17:09:40Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-07T17:09:41Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-08T14:20:01Z

Remember to squash merge!

github-actions · 2025-05-08T14:20:11Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-08T14:20:12Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

…e/warp into aa-slidetags-tests

github-actions · 2025-05-11T23:23:21Z

Remember to squash merge!

github-actions · 2025-05-11T23:23:30Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-11T23:23:31Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-12T17:27:01Z

Remember to squash merge!

…e/warp into aa-slidetags-tests

github-actions · 2025-05-27T13:56:54Z

Remember to squash merge!

github-actions · 2025-05-27T13:57:03Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-27T13:57:03Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-27T13:57:24Z

Remember to squash merge!

github-actions · 2025-05-27T13:57:34Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-27T13:57:36Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

…e/warp into aa-slidetags-tests

github-actions · 2025-05-27T15:07:28Z

Remember to squash merge!

github-actions · 2025-05-27T15:07:38Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-27T15:07:38Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

…etags-tests

github-actions · 2025-05-27T18:44:33Z

Remember to squash merge!

github-actions · 2025-05-27T18:44:42Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-27T18:44:42Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-27T19:03:34Z

Remember to squash merge!

github-actions · 2025-05-27T19:03:44Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-27T19:03:46Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-27T19:19:08Z

Remember to squash merge!

github-actions · 2025-05-27T19:19:16Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

github-actions · 2025-05-27T19:19:16Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-27T19:29:15Z

Remember to squash merge!

github-actions · 2025-05-27T19:29:25Z

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

github-actions · 2025-05-27T19:29:27Z

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

test

9610f7a

test

f8c19c4

Updated pipeline_versions.txt with all pipeline version information

2c71a6c

aawdeh added 2 commits May 7, 2025 10:49

test

a12c095

Merge branch 'aa-slidetags-tests' of https://github.com/broadinstitut…

12f6981

…e/warp into aa-slidetags-tests

test

82f2828

Merge branch 'develop' into aa-slidetags-tests

d86dc84

aawdeh added 2 commits May 11, 2025 19:22

test

ce1cdc1

Merge branch 'aa-slidetags-tests' of https://github.com/broadinstitut…

da2e43e

…e/warp into aa-slidetags-tests

aawdeh added 2 commits May 12, 2025 13:26

test

828e797

Merge branch 'develop' into aa-slidetags-tests

cc43fb3

Merge branch 'aa-slidetags-tests' of https://github.com/broadinstitut…

713eeb7

…e/warp into aa-slidetags-tests

Merge branch 'develop' into aa-slidetags-tests

92cc183

aawdeh added 2 commits May 27, 2025 11:07

fix compareh5file task

50df79e

Merge branch 'aa-slidetags-tests' of https://github.com/broadinstitut…

0f846b3

…e/warp into aa-slidetags-tests

nikellepetrillo added 2 commits May 27, 2025 14:44

exclude some columns from tests.

a890201

Merge remote-tracking branch 'origin/aa-slidetags-tests' into aa-slid…

6c65938

…etags-tests

exclude some columns from tests.

3aec150

exclude some columns from tests.

0283c3e

exclude some columns from tests.

235d48d

PD-2997: Add tests for Slide-Tags pipeline #1585

Are you sure you want to change the base?

PD-2997: Add tests for Slide-Tags pipeline #1585

Conversation

aawdeh commented May 6, 2025

Checklist

Uh oh!

github-actions bot commented May 6, 2025

Uh oh!

github-actions bot commented May 6, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 6, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 7, 2025

Uh oh!

github-actions bot commented May 7, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 7, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 7, 2025

Uh oh!

github-actions bot commented May 7, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 7, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 7, 2025

Uh oh!

github-actions bot commented May 7, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 7, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 8, 2025

Uh oh!

github-actions bot commented May 8, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 8, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 11, 2025

Uh oh!

github-actions bot commented May 11, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 11, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 12, 2025

Uh oh!

github-actions bot commented May 27, 2025

Uh oh!

github-actions bot commented May 27, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 27, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 27, 2025

Uh oh!

github-actions bot commented May 27, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 27, 2025

🔍Changelog Validation Results:

Uh oh!

github-actions bot commented May 27, 2025

Uh oh!

github-actions bot commented May 27, 2025

🔍Version Validation Results:

Uh oh!

github-actions bot commented May 27, 2025

🔍Changelog Validation Results: