Yaulab_pipelines_templates

YAU-Lab¹ pipelines to process electrophysiologycal data using SpikeInterface² (raw data is NWB³ formatted⁴):

a) Create NWB file from ripple & behavioral files

b) Run spikeinterface preprocessing from raw-NWB

c) Run spikeinterface sorting on the preprocessing results

d) Process raw-NWB to export LFPs & re-sampling of behavioral signals into a new prepro-NWB file

e) Export the curated results from PHY or spikeinterface-SortingAnalyzer into a preproNWB

NOTE: it will make use of the yaulab_processing toolbox

Name		Name	Last commit message	Last commit date
Latest commit History 14 Commits
README.md		README.md
check_ReceptiveFields.ipynb		check_ReceptiveFields.ipynb
convertNWB_template.py		convertNWB_template.py
export_curated_sorting_template.ipynb		export_curated_sorting_template.ipynb
postprocessing_template_preliminar.ipynb		postprocessing_template_preliminar.ipynb
preproNWB_range_template.ipynb		preproNWB_range_template.ipynb
preproNWB_template.ipynb		preproNWB_template.ipynb
preprocessing_template.ipynb		preprocessing_template.ipynb
run_prepro_and_sorting_template.ipynb		run_prepro_and_sorting_template.ipynb
run_prepro_range_template.ipynb		run_prepro_range_template.ipynb
run_prepro_template.ipynb		run_prepro_template.ipynb

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