This is an example of application of deep learning to protein secondary structure prediction. This example is based on [1], but some minor modifications are applied.
See commentary.md for the detail explanation
Retrieve dataset
bash get_data.sh
Train
PYTHONPATH="." python tools/train.py
[1] Li, Z., & Yu, Y. (2016). Protein Secondary Structure Prediction Using Cascaded Convolutional and Recurrent Neural Networks. arXiv preprint arXiv:1604.07176.