Chore Update optlang to 1.5 #281
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iJO1366.pickle was generated with the following snippet:
```python
import pickle
import cobra
model = cobra.io.read_sbml_model("tests/data/iJO1366.xml")
with open("tests/data/iJO1366.pickle", "wb") as f:
pickle.dump(model, f)
```
Codecov Report
@@ Coverage Diff @@
## devel #281 +/- ##
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Coverage 64.23% 64.23%
=======================================
Files 58 58
Lines 5576 5576
Branches 949 949
=======================================
Hits 3582 3582
Misses 1789 1789
Partials 205 205 Continue to review full report at Codecov.
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Closing since it was resolved upstream. |
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Related to DD-DeCaF/modeling-base#9 and opencobra/cobrapy#1011
Description
optlangwas upgraded to version >=1.5, mirroringcobrapy(which was pinned to >= 0.22, the MRV for optlang 1.5). This removes some warnings and leaves cameo up to date with cobrapy.Implementation
optlang>=1.5 andcobrapy>=0.22.0.pickleinto aoptlang1.5object (thetolerancesattribute was making it fail).