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1. RISC RISC Public

   A R package for integrated scRNA-seq data analysis using the RPCI algorithm

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2. scDAPP scDAPP Public

   A end-to-end scRNA-seq analysis pipeline for cross-group comparison

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3. panCAF panCAF Public

   Codes for analyzing heterogeneity of cancer-associated fibroblasts in multiple cancers

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4. HSMotifDiscover HSMotifDiscover Public

   The HS sequences are diffrent from DNA, RNA and protein sequences in a few ways. So, the Gibbs-Sampling algorithm has been implemented in such a way, it can discover motifs in the heparan sulphate …

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5. Stereo3D Stereo3D Public

   Visualization in three-dimensional (3D) space is a standard and critical process for examining the complex structure of high dimensional data. Stereo imaging technology can be adopted to enhance 3D…

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6. metacell_based_DEA metacell_based_DEA Public

   Using SEACells to generate metacells and used as metareplicates for differential gene expression analysis.

   Jupyter Notebook 2