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Add SSR_VibraProfiler recipe #53634

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Add SSR_VibraProfiler recipe

Software Overview

SSR_VibraProfiler is a software tool designed for constructing DNA fingerprint databases for plant varieties, supporting SSR data analysis, model training, cross-validation, and prediction.

Version Information

Main Features

The software provides the following command-line utilities:

  • SSR_VibraProfiler_model_build: Builds SSR-related models
  • SSR_VibraProfiler_evaluation: Evaluates models
  • SSR_VibraProfiler_model_predict: Performs model prediction
  • SSR_VibraProfiler_cross_validation: Conducts cross-validation

Dependencies

  • Python Version: 3.x
  • Required Packages:
    • numpy 1.26.4
    • pandas 1.3.1
    • scikit-learn 0.24.2
    • matplotlib 3.8.0

Testing

  • The following commands verify basic functionality:
    SSR_VibraProfiler_model_build --help
    SSR_VibraProfiler_evaluation --help
  • The package is correctly imported as ssr_vibraprofiler.

Notes

This tool is specifically designed for SSR analysis in plant variety research, aiding in DNA fingerprint database construction.

@BiocondaBot please add label

sha256: f912a00b084dc90af8576a4d688bf768df8fb817867580b0ace2755965fa6887

build:
number: 1
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Suggested change
number: 1
number: 1
noarch: python


about:
home: https://github.com/Olcat35412/SSR_VibraProfiler
license: MIT
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Please add license_file too

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Thank you! I will add license_file

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2 participants