Refactor update def #15
Workflow file for this run
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| name: Build Singularity Container | |
| on: | |
| schedule: | |
| - cron: '0 2 1 * *' | |
| push: | |
| branches-ignore: | |
| - master | |
| paths: | |
| - 'resources/retinal-rl.def' | |
| pull_request: | |
| branches: | |
| - master | |
| paths: | |
| - 'resources/retinal-rl.def' | |
| jobs: | |
| singularity-build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: eWaterCycle/setup-apptainer@v2 | |
| with: | |
| apptainer-version: 1.3.0 | |
| - name: Build Singularity container | |
| run: apptainer build retinal-rl.sif resources/retinal-rl.def | |
| - name: Scan classification config / ensure minimal functionality | |
| run: | | |
| cp -r resources/config_templates/* config/ | |
| singularity exec retinal-rl.sif python main.py -m +experiment=cifar10-class-recon command=scan system.device=cpu | |
| - name: Push to ghcr.io | |
| run: | | |
| singularity registry login --username ${{ github.actor }} --password ${{ secrets.GITHUB_TOKEN }} oras://ghcr.io | |
| singularity push retinal-rl.sif oras://ghcr.io/berenslab/retinal-rl:singularity-image-latest |