Merge pull request #499 from bento-platform/fix/cbioportal_export

fix(workflows): specify reference genome ID in cbioportal export
bento-platform · Apr 25, 2024 · ddd8dae · ddd8dae
2 parents d94cfa9 + 9448206
commit ddd8dae
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/chord_metadata_service/chord/export/cbioportal.py b/chord_metadata_service/chord/export/cbioportal.py
@@ -141,7 +141,7 @@ def study_export_meta(dataset: Dataset, file_handle: TextIO) -> None:
 
         "add_global_case_list": "true",  # otherwise causes an error at validation
         # tags_file: ?
-        # reference_genome: ?  TODO
+        "reference_genome_id": "hg38",  # TODO: should not be hard-coded...
     }
 
     # optional fields