Migrate from Jekyll to Hugo #21
Conversation
Co-authored-by: bendichter <[email protected]>
- Convert homepage and CV page to Hugo - Migrate all 9 blog posts from Jekyll to Hugo content structure - Remove Jekyll-specific frontmatter and preserve all content Co-authored-by: bendichter <[email protected]>
- Convert publications, talks, teaching, and portfolio collections - Create section index pages for proper Hugo navigation - Preserve all academic content and metadata Co-authored-by: bendichter <[email protected]>
- Create responsive academic website layout - Add author profile and social links integration - Support for posts, pages, and collections display Co-authored-by: bendichter <[email protected]>
- Create responsive academic website styling - Support for mobile and desktop layouts - Academic theme with author profile integration Co-authored-by: bendichter <[email protected]>
WalkthroughThis change introduces a new static website structure using Hugo, replacing the previous Jekyll-based setup. It adds configuration, templates, content files (posts, publications, talks, teaching, portfolio, CV, about), and a comprehensive CSS stylesheet. The new structure organizes content into dedicated directories and implements layouts for single pages, lists, and the homepage. Changes
Sequence Diagram(s)sequenceDiagram
participant User
participant HugoSite
participant ContentFiles
participant Templates
participant StaticAssets
User->>HugoSite: Request page (e.g., /posts/)
HugoSite->>ContentFiles: Load relevant markdown content
HugoSite->>Templates: Apply appropriate layout (list, single, index)
HugoSite->>StaticAssets: Load CSS and images
Templates->>User: Rendered HTML page with content and styling
Assessment against linked issues
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@claude Error: command error: failed to load modules: module "" not found in "/Users/bdichter/dev/bendichter.github.io/themes"; either add it as a Hugo Module or store it in "/Users/bdichter/dev/bendichter.github.io/themes".: module does not exist |
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Claude finished @bendichter's task —— View job I'll help fix the Hugo module loading error. Let me analyze the configuration and resolve this issue. Todo List
SolutionFound and fixed the issue! The problem was in What I did:
Since you have your own custom layouts and styling, you don't need to specify a theme. Hugo will use your custom layouts from the The site should now build successfully with Hugo! Try running |
![coderabbitai[bot]](https://avatars.githubusercontent.com/in/347564?s=60&v=4){kind=small}
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Actionable comments posted: 6
🧹 Nitpick comments (53)
static/css/main.css (3)
1-6: Use comprehensive box‐sizing reset
Consider extending the universal selector to include pseudo-elements for a more robust reset. This will ensure consistent box sizing on all elements and their::before/::afterpseudo-elements:* { - margin: 0; - padding: 0; - box-sizing: border-box; + margin: 0; + padding: 0; + box-sizing: border-box; +} +*::before, +*::after { + box-sizing: inherit; }
44-55: Enhance navigation link accessibility
Add visible focus styles to.nav-links ato support keyboard navigation:.nav-links a { text-decoration: none; color: #666; font-weight: 500; transition: color 0.2s; + outline: none; } +.nav-links a:focus-visible { + outline: 2px dashed #007acc; + outline-offset: 2px; +}This ensures keyboard users can clearly identify which link is focused.
331-340: DRY up responsive media queries
Several media queries adjust similar selectors. You can merge common rules to reduce duplication and simplify maintenance:@media (max-width: 768px), (max-width: 480px) { .nav-links { gap: 1rem; } /* …other shared responsive rules… */ }content/talks/_index.md (1)
6-6: Consider moving the description into front matter
Embedding the description under adescriptionkey improves SEO and template clarity:--- title: "Talks" layout: list +description: "Conference talks and presentations." --- - Conference talks and presentations.With this change, templates can reference
.Params.descriptiondirectly.content/publications/_index.md (1)
6-6: Promote description metadata
Add adescriptionparameter in the front matter to centralize metadata:--- title: "Publications" layout: list +description: "Research publications and academic papers." --- - Research publications and academic papers.This makes the description accessible via
.Params.descriptionin your templates.content/teaching/_index.md (1)
6-6: Add description to front matter
Centralize the section description for easier template access:--- title: "Teaching" layout: list +description: "Teaching experience and educational activities." --- - Teaching experience and educational activities.This allows
.Params.descriptionto be used directly.content/portfolio/_index.md (1)
6-6: Embed description in front matter
Streamline metadata handling by including the description as a front matter parameter:--- title: "Portfolio" layout: list +description: "Project portfolio and featured work." --- - Project portfolio and featured work.This makes the description usable via
.Params.descriptionin your list templates.content/cv.md (1)
5-5: Add a title attribute for accessibility
Include atitleon the<embed>element to describe its content for assistive technologies, for example:-<embed src="/files/BenDichterCV.pdf" width="800px" height="2100px" /> +<embed src="/files/BenDichterCV.pdf" width="800px" height="2100px" title="Ben Dichter CV PDF"/>content/publications/2009-10-01-paper-title-number-1.md (3)
11-11: Leverage front matter or Hugo templating for the download link
Instead of hard-coding the URL, reference thepaperurlparam or use Hugo’s templating functions to keep content DRY, e.g.:[Download paper here]({{ .Params.paperurl }})
13-13: Prefer Markdown italics over HTML
Use*Journal 1*instead of<i>Journal 1</i>for consistent styling:-Recommended citation: Your Name, You. (2009). "Paper Title Number 1." <i>Journal 1</i>. 1(1). +Recommended citation: Your Name, You. (2009). "Paper Title Number 1." *Journal 1*. 1(1).
13-13: Add trailing newline
Ensure there's a blank line at the end of the file to satisfy POSIX conventions and prevent parser warnings.content/portfolio/portfolio-1.md (1)
3-3: Prefer Markdown syntax for images and breaks
Rather than embedding raw HTML, use Markdown for readability and maintainability:-excerpt: "Package for creating broken axis plots in matplotlib<br/><img src='/images/500x300.png'>" +excerpt: "Package for creating broken axis plots in matplotlib\n\n"content/teaching/2015-spring-teaching-2.md (2)
9-9: Capitalize "Markdown"
Use the proper noun when referring to the formatting language:-You can use markdown like any other post. +You can use Markdown like any other post.🧰 Tools
🪛 LanguageTool
[grammar] ~9-~9: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...n of a teaching experience. You can use markdown like any other post. Heading 1 ====== ...(MARKDOWN_NNP)
11-18: Use ATX heading syntax for consistency
Switch from underline-style headings to#,##,###for clearer, more maintainable Markdown:-Heading 1 -====== + # Heading 1 -Heading 2 -====== + ## Heading 2 -Heading 3 -====== + ### Heading 3content/portfolio/portfolio-2.md (1)
6-6: Fix grammar and capitalize "Markdown"
Apply this diff to correct the sentence structure and proper noun usage:-This is an item in your portfolio. It can be have images or nice text. If you name the file .md, it will be parsed as markdown. If you name the file .html, it will be parsed as HTML. +This is an item in your portfolio. It can have images or nice text. If you name the file .md, it will be parsed as Markdown. If you name the file .html, it will be parsed as HTML.🧰 Tools
🪛 LanguageTool
[grammar] ~6-~6: Consider using only “have” or the present participle “be having”.
Context: ...is is an item in your portfolio. It can be have images or nice text. If you name the fi...(MD_BE_NON_VBP)
[grammar] ~6-~6: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...name the file .md, it will be parsed as markdown. If you name the file .html, it will be...(MARKDOWN_NNP)
content/talks/2020-05-13-nwbwidgets-1.md (2)
2-6: Add location metadata for consistency. Other talk entries include alocationfield to specify the city or format (e.g., online). Consider adding it here to maintain uniform front matter.venue: "NWB Remote User Days 2020" + location: "Remote (Online)"
12-20: Use Hugo YouTube shortcode for responsive embeds. Embedding raw<iframe>HTML can be replaced with Hugo’s built-inyoutubeshortcode for cleaner markup and better maintainability.- <div class="embed-container"> - <iframe - src="https://www.youtube.com/embed/XoWdLNS_wHE" - width="700" - height="480" - frameborder="0" - allowfullscreen=""> - </iframe> - </div> + {{< youtube XoWdLNS_wHE >}}content/teaching/2014-spring-teaching-1.md (1)
9-9: Capitalize 'Markdown'. The sentence “You can use markdown like any other post.” should use the proper noun “Markdown.”- This is a description of a teaching experience. You can use markdown like any other post. + This is a description of a teaching experience. You can use Markdown like any other post.🧰 Tools
🪛 LanguageTool
[grammar] ~9-~9: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...n of a teaching experience. You can use markdown like any other post. Heading 1 ====== ...(MARKDOWN_NNP)
content/posts/2020-07-12-brokenaxes.md (2)
15-15: Hyphenate 'y-axis'. The phrase “y axis” is normally written with a hyphen.- You can create discontinuities along the x and/or y axis. + You can create discontinuities along the x and/or y-axis.🧰 Tools
🪛 LanguageTool
[misspelling] ~15-~15: This word is normally spelled with a hyphen.
Context: ...eate discontinuities along the x and/or y axis. It also has compatibility for a number...(EN_COMPOUNDS_Y_AXIS)
9-14: Use Hugo figure shortcode for images. Replace raw<img>tags with Hugo’sfigureshortcode for responsive layouts, captions, and uniform styling.- <img width="200" src="https://raw.githubusercontent.com/bendichter/brokenaxes/master/broken_python_snake.png" title="broken python snake" alt="broken python snake"/> + {{< figure src="https://raw.githubusercontent.com/bendichter/brokenaxes/master/broken_python_snake.png" caption="Broken Python Snake" width="200" >}} ... - <img width="400" src="https://raw.githubusercontent.com/bendichter/brokenaxes/master/example2.png" title="brokenaxes example" alt="brokenaxes example"/> + {{< figure src="https://raw.githubusercontent.com/bendichter/brokenaxes/master/example2.png" caption="brokenaxes example" width="400" >}}content/talks/2018-08-10-NWB-extension-simulation.md (1)
13-21: Use Hugo YouTube shortcode for embed. Swap the raw<iframe>for Hugo’syoutubeshortcode to simplify markup and ensure responsiveness.- <div class="embed-container"> - <iframe - src="https://www.youtube.com/embed/uuYQW0EE2GY" - width="700" - height="480" - frameborder="0" - allowfullscreen=""> - </iframe> - </div> + {{< youtube uuYQW0EE2GY >}}content/publications/2015-10-01-paper-title-number-3.md (3)
5-5: Use HTTPS forpaperurl. Switch tohttps://to ensure secure linking.- paperurl: 'http://academicpages.github.io/files/paper3.pdf' + paperurl: 'https://academicpages.github.io/files/paper3.pdf'
6-8: Use Markdown italics instead of HTML<i>. For consistency, replace the HTML tag in thecitationfield.- citation: 'Your Name, You. (2015). "Paper Title Number 3." <i>Journal 1</i>. 1(3).' + citation: 'Your Name, You. (2015). "Paper Title Number 3." _Journal 1_. 1(3).'
14-14: Add trailing newline. Files should end with a newline character to comply with POSIX standards.content/publications/2010-10-01-paper-title-number-2.md (2)
1-8: Use secure protocol for external links in front matter
Thepaperurlfront matter is usinghttp://. It's best practice to switch tohttps://where available to ensure secure delivery:- paperurl: 'http://academicpages.github.io/files/paper2.pdf' + paperurl: 'https://academicpages.github.io/files/paper2.pdf'
10-14: Avoid duplication by leveraging front matter for citations
You're hard-coding the recommended citation in the body, which duplicates thecitationfront matter. To keep content DRY and simplify updates, consider rendering{{ .Params.citation }}in your single-page template instead of repeating it in each markdown file.layouts/_default/single.html (2)
10-16: Make header tags clickable for consistency
Currently header tags render as plain<span>, while footer tags link to/tags/.... For a unified UX, render header tags as links too:- {{ if .Params.tags }} - <div class="post-tags"> - {{ range .Params.tags }} - <span class="tag">{{ . }}</span> - {{ end }} - </div> - {{ end }} + {{ if .Params.tags }} + <div class="post-tags"> + {{ range .Params.tags }} + <a href="{{ printf "/tags/%s" (urlize .) | relURL }}" class="tag">{{ . }}</a> + {{ end }} + </div> + {{ end }}
23-31: Slugify tag URLs to handle spaces and punctuation
Use Hugo’surlizeon tag names to generate safe URLs. For example:- {{ range .Params.tags }} - <a href="{{ printf "/tags/%s" . | relURL }}" class="tag-link">{{ . }}</a> - {{ end }} + {{ range .Params.tags }} + <a href="{{ printf "/tags/%s" (urlize .) | relURL }}" class="tag-link">{{ . }}</a> + {{ end }}layouts/_default/list.html (1)
12-20: Sort and paginate your listing for better navigation
Iterating.Pageswithout sorting shows files in filename order. Users expect the newest items first, and pagination helps on long lists. Consider:- {{ range .Pages }} + {{ $paginator := .Paginate (.Pages.ByDate.Reverse) }} + {{ range $paginator.Pages }}Then add pagination controls (e.g.,
{{ if $paginator.HasPrev }}/{{ if $paginator.HasNext }}) at the bottom.content/_index.md (2)
1-3: Enhance SEO with a meta description
Adding adescriptionin the front matter will generate a<meta name="description">and improve search visibility:--- title: "About me" +description: "Dr. Benjamin Dichter’s background, vision, and work in neuroscience data science and open collaboration." ---
5-14: Add quick links to other sections
To improve site navigation, consider including links to key sections (CV, Publications, Portfolio) directly in the about page:Feel free to also explore my [CV](/cv/), [Publications](/publications/), and [Portfolio](/portfolio/).hugo.toml (1)
27-32: Consider a Home/About menu entry
Your main menu links to content sections, but there’s no “Home” or “About” entry. For easier navigation, you could add:[[menu.main]] name = "Home" url = "/" weight = 5Also applies to: 44-49
content/posts/2024-02-07-reachmyreps.md (3)
2-8: Standardize tag casingThe frontmatter tags mix lowercase (
civic tech,democracy) and uppercase (AI). Consider using consistent lowercase for all tags (e.g.,ai) to maintain taxonomy uniformity across the site.
12-13: Use Hugo URL helpers for imagesReferencing the screenshot as
/images/reachmyreps-screenshot.pngassumes a leading slash; for portability, use Hugo’srelURLorabsURLhelper. For example:![ReachMyReps interface]({{ "images/reachmyreps-screenshot.png" | relURL }})Ensure the image is placed in
static/images.
20-22: Streamline wording for clarityThis sentence reads "ReachMyReps removes these barriers by automating the tedious parts while keeping you in control of the message." Consider shortening "keeping you in control of the message" to "while you retain control" to reduce wordiness.
🧰 Tools
🪛 LanguageTool
[style] ~22-~22: ‘in control of’ might be wordy. Consider a shorter alternative.
Context: ...ing the tedious parts while keeping you in control of the message. ## How It Works The app ...(EN_WORDINESS_PREMIUM_IN_CONTROL_OF)
layouts/index.html (1)
4-7: Accessibility & performance enhancement for avatarConsider adding
loading="lazy"to the sidebar avatar<img>tag to defer off-screen image loading:- <img src="{{ printf "/images/%s" .Site.Params.avatar | relURL }}" alt="{{ .Site.Params.name }}" class="avatar"> + <img src="{{ printf "/images/%s" .Site.Params.avatar | relURL }}" alt="{{ .Site.Params.name }}" class="avatar" loading="lazy">content/posts/2018-03-29-tenseflow.md (2)
7-7: Prefer local assets over external linksThis screenshot is pulled directly from GitHub. For reliability and faster page loads, move the image into
static/imagesand reference it locally:
24-28: Correct duplicated wordIn the sentence "parse the sentence to determine what words are are being used as verbs", remove the extra "are" so it reads "words are being used as verbs".
🧰 Tools
🪛 LanguageTool
[uncategorized] ~24-~24: A comma might be missing here.
Context: ...oom.") Vacuum is not a special word- in fact if you think about it, most verbs i...(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[duplication] ~26-~26: Possible typo: you repeated a word.
Context: ...se the sentence to determine what words are are being used as verbs. You also need to p...(ENGLISH_WORD_REPEAT_RULE)
content/posts/2022-07-18-git-timesheet.md (1)
20-22: Fix typo in descriptionThe phrase "allows you to tranform handles" should be corrected to "allows you to transform handles".
content/posts/2018-04-23-osx-jupyter-launcher.md (2)
10-10: Simplify wordingThe phrase "on a regular basis" can be made more concise as "regularly". For example: "If you use Jupyter regularly,...".
🧰 Tools
🪛 LanguageTool
[style] ~10-~10: ‘on a regular basis’ might be wordy. Consider a shorter alternative.
Context: ... OSX - python --- If you use Jupyter on a regular basis, the steps to launch a notebook are pro...(EN_WORDINESS_PREMIUM_ON_A_REGULAR_BASIS)
19-19: Use Hugo’s static file pathThe download link
../../files/run_jupyter_notebook.ziprelies on relative paths. Hugo serves files from/files/. Update to an absolute path or userelURL:[Download me!]({{ "files/run_jupyter_notebook.zip" | relURL }})🧰 Tools
🪛 LanguageTool
[misspelling] ~19-~19: You can use ‘ever’ as an intensifier, but if the phrase is a pronoun or an adverb, use “wherever” without a space.
Context: ...k to unpack and drag to Applications or where ever you want to keep it. Navigate to a not...(EVER_INTENSIFIER)
layouts/_default/baseof.html (2)
10-21: Enhance social sharing metadata by adding OG/Twitter image tags
Currently the template definesog:titleandtwitter:titlebut lacks image metadata. Addingog:imageandtwitter:imageimproves link previews on social platforms.
Proposed diff:<head> ... + <!-- Open Graph Image --> + <meta property="og:image" content="{{ .Site.Params.ogImage | default "/images/social-share.png" | relURL }}"> + <!-- Twitter Card Image --> + <meta name="twitter:image" content="{{ .Site.Params.twitterImage | default "/images/social-share.png" | relURL }}"> ... </head>
34-36: Improve navigation accessibility
Consider adding an ARIA label to the<nav>element for better screen-reader support:- <nav class="site-nav"> + <nav class="site-nav" aria-label="Main navigation">content/posts/2022-07-18-grouped_bar.md (2)
23-30: Enrich docstring parameter descriptions
The parametersclabelsandxlabelslack detailed explanations. Consider updating the signature and docstring:-def grouped_barplot( - data, - clabels: List[str], - xlabels: List[str], +def grouped_barplot( + data: Sequence[Sequence[Number]], + clabels: List[str], # Category labels, length = number of data series + xlabels: List[str], # X-axis labels, length = number of bars per groupAnd in the docstring:
- clabels: list(str) - xlabels: list(str) + clabels: List[str] + Category names corresponding to each data row. + xlabels: List[str] + Labels for each x-position.
86-86: Use absolute image paths for Hugo
Relative paths like../../images/grouped_barplot.pngmay break under Hugo’s permalinks. Convert to absolute paths:-  + content/posts/2022-07-18-stacked-step-plot.md (2)
14-14: Refine phrasing by removing redundant "I personally"
The phrase can be simplified for conciseness:- I personally had a need for this when I wanted to visualize my man-month commitment... + I had a need for this when visualizing my man-month commitment...🧰 Tools
🪛 LanguageTool
[style] ~14-~14: This phrase is often redundant. Consider writing “I” unless you want to emphasize that you and not someone else will do something. Then, commas might be missing.
Context: ...t types that begin and end all at once. I personally had a need for this when I wanted to vi...(I_MYSELF)
122-122: Use absolute image path
Convert the image link to an absolute path to ensure it resolves correctly under Hugo permalinks:-  + content/posts/2024-03-31-code-crafter.md (2)
1-7: Consider adding adescriptionfront matter field
Including adescriptionimproves SEO and controls the meta description shown on listing pages:--- title: 'The new Code Crafter package for Python AST transformations' +description: 'Overview of Code Crafter, a Python AST transformation library for programmatic code editing.' date: 2024-03-31 tags:
50-70: Format method names as inline code in lists
Wrapping bullet items in backticks enhances readability:- * append + * `append` - * extend + * `extend` - * insert + * `insert` ... - * discard + * `discard`content/posts/2022-07-17-spiral-plot.md (4)
9-9: Add commas for clarity in introductory sentence- Let's use for example Google Trends results for the search term "gifts." + Let's use, for example, Google Trends results for the search term "gifts."🧰 Tools
🪛 LanguageTool
[uncategorized] ~9-~9: A comma might be missing here.
Context: ... tags: - matplotlib - python --- Let's use for example Google Trends results for t...(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[uncategorized] ~9-~9: A comma might be missing here.
Context: ... matplotlib - python --- Let's use for example Google Trends results for the search te...(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
15-15: Spell "Christmastime" as one word- ...with the max around Christmas time. + ...with the max around Christmastime.🧰 Tools
🪛 LanguageTool
[uncategorized] ~15-~15: Possible missing comma found.
Context: ... It looks like this might be an annual cycle with the max around Christmas time. It...(AI_HYDRA_LEO_MISSING_COMMA)
[uncategorized] ~15-~15: The noun “Christmastime” (= the Christmas season) is normally spelled as one word.
Context: ...be an annual cycle with the max around Christmas time. It can be hard to create visualization...(CHRISTMAS_TIME)
26-26: Capitalize “Google” and use “Trends” plural- Here is the google trend for "gifts" shown as a spiral plot: + Here is the Google Trends data for "gifts" shown as a spiral plot:🧰 Tools
🪛 LanguageTool
[grammar] ~26-~26: “Google” is a proper noun and needs to be capitalized.
Context: ...time of year on every loop. Here is the google trend for "gifts" shown as a spiral plo...(A_GOOGLE)
12-12: Use absolute image paths for Hugo
Replace relative image references to ensure they resolve under Hugo’s permalinks:-  -  -  +  +  + Also applies to: 28-28, 35-35
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📒 Files selected for processing (30)
content/_index.md(1 hunks)content/cv.md(1 hunks)content/portfolio/_index.md(1 hunks)content/portfolio/portfolio-1.md(1 hunks)content/portfolio/portfolio-2.md(1 hunks)content/posts/2018-03-29-tenseflow.md(1 hunks)content/posts/2018-04-23-osx-jupyter-launcher.md(1 hunks)content/posts/2020-07-12-brokenaxes.md(1 hunks)content/posts/2022-07-17-spiral-plot.md(1 hunks)content/posts/2022-07-18-git-timesheet.md(1 hunks)content/posts/2022-07-18-grouped_bar.md(1 hunks)content/posts/2022-07-18-stacked-step-plot.md(1 hunks)content/posts/2024-02-07-reachmyreps.md(1 hunks)content/posts/2024-03-31-code-crafter.md(1 hunks)content/publications/2009-10-01-paper-title-number-1.md(1 hunks)content/publications/2010-10-01-paper-title-number-2.md(1 hunks)content/publications/2015-10-01-paper-title-number-3.md(1 hunks)content/publications/_index.md(1 hunks)content/talks/2018-08-10-NWB-extension-simulation.md(1 hunks)content/talks/2020-05-13-nwbwidgets-1.md(1 hunks)content/talks/_index.md(1 hunks)content/teaching/2014-spring-teaching-1.md(1 hunks)content/teaching/2015-spring-teaching-2.md(1 hunks)content/teaching/_index.md(1 hunks)hugo.toml(1 hunks)layouts/_default/baseof.html(1 hunks)layouts/_default/list.html(1 hunks)layouts/_default/single.html(1 hunks)layouts/index.html(1 hunks)static/css/main.css(1 hunks)
🧰 Additional context used
🪛 LanguageTool
content/portfolio/portfolio-2.md
[grammar] ~6-~6: Consider using only “have” or the present participle “be having”.
Context: ...is is an item in your portfolio. It can be have images or nice text. If you name the fi...
(MD_BE_NON_VBP)
[grammar] ~6-~6: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...name the file .md, it will be parsed as markdown. If you name the file .html, it will be...
(MARKDOWN_NNP)
content/teaching/2014-spring-teaching-1.md
[grammar] ~9-~9: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...n of a teaching experience. You can use markdown like any other post. Heading 1 ====== ...
(MARKDOWN_NNP)
content/teaching/2015-spring-teaching-2.md
[grammar] ~9-~9: Did you mean the formatting language “Markdown” (= proper noun)?
Context: ...n of a teaching experience. You can use markdown like any other post. Heading 1 ====== ...
(MARKDOWN_NNP)
content/posts/2020-07-12-brokenaxes.md
[misspelling] ~15-~15: This word is normally spelled with a hyphen.
Context: ...eate discontinuities along the x and/or y axis. It also has compatibility for a number...
(EN_COMPOUNDS_Y_AXIS)
content/posts/2024-02-07-reachmyreps.md
[style] ~22-~22: ‘in control of’ might be wordy. Consider a shorter alternative.
Context: ...ing the tedious parts while keeping you in control of the message. ## How It Works The app ...
(EN_WORDINESS_PREMIUM_IN_CONTROL_OF)
content/posts/2022-07-18-git-timesheet.md
[uncategorized] ~14-~14: A comma might be missing here.
Context: ...orking on the project for that week. Of course this is imperfect- someone could work a...
(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
content/posts/2022-07-18-stacked-step-plot.md
[style] ~14-~14: This phrase is often redundant. Consider writing “I” unless you want to emphasize that you and not someone else will do something. Then, commas might be missing.
Context: ...t types that begin and end all at once. I personally had a need for this when I wanted to vi...
(I_MYSELF)
content/posts/2018-03-29-tenseflow.md
[uncategorized] ~20-~20: This verb may not be in the correct tense. Consider changing the tense to fit the context better.
Context: ...he store.' ``` Little did I know, this is a really tough task, for a few reasons....
(AI_EN_LECTOR_REPLACEMENT_VERB_TENSE)
[uncategorized] ~23-~23: You might be missing the article “a” here.
Context: ..."Please hand me the vacuum.") or verb ("Please vacuum the dining room....
(AI_EN_LECTOR_MISSING_DETERMINER_A)
[uncategorized] ~24-~24: A comma might be missing here.
Context: ...oom.") Vacuum is not a special word- in fact if you think about it, most verbs i...
(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[duplication] ~26-~26: Possible typo: you repeated a word.
Context: ...se the sentence to determine what words are are being used as verbs. You also need to p...
(ENGLISH_WORD_REPEAT_RULE)
content/posts/2022-07-17-spiral-plot.md
[uncategorized] ~9-~9: A comma might be missing here.
Context: ... tags: - matplotlib - python --- Let's use for example Google Trends results for t...
(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[uncategorized] ~9-~9: A comma might be missing here.
Context: ... matplotlib - python --- Let's use for example Google Trends results for the search te...
(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[uncategorized] ~15-~15: Possible missing comma found.
Context: ... It looks like this might be an annual cycle with the max around Christmas time. It...
(AI_HYDRA_LEO_MISSING_COMMA)
[uncategorized] ~15-~15: The noun “Christmastime” (= the Christmas season) is normally spelled as one word.
Context: ...be an annual cycle with the max around Christmas time. It can be hard to create visualization...
(CHRISTMAS_TIME)
[style] ~16-~16: To elevate your writing, try using a synonym here.
Context: ...e max around Christmas time. It can be hard to create visualizations that bring out...
(HARD_TO)
[grammar] ~26-~26: “Google” is a proper noun and needs to be capitalized.
Context: ...time of year on every loop. Here is the google trend for "gifts" shown as a spiral plo...
(A_GOOGLE)
content/posts/2018-04-23-osx-jupyter-launcher.md
[style] ~10-~10: ‘on a regular basis’ might be wordy. Consider a shorter alternative.
Context: ... OSX - python --- If you use Jupyter on a regular basis, the steps to launch a notebook are pro...
(EN_WORDINESS_PREMIUM_ON_A_REGULAR_BASIS)
[uncategorized] ~16-~16: A comma might be missing here.
Context: ... in the user-friendly land of Jupyter. Now of course all of these skills are usefu...
(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[uncategorized] ~17-~17: A comma might be missing here.
Context: ... user-friendly land of Jupyter. Now of course all of these skills are useful, and nec...
(AI_EN_LECTOR_MISSING_PUNCTUATION_COMMA)
[uncategorized] ~17-~17: Use a comma before ‘and’ if it connects two independent clauses (unless they are closely connected and short).
Context: ...r Hub. They'll just need to click a link and they'll be up and running in no time! T...
(COMMA_COMPOUND_SENTENCE)
[style] ~17-~17: Consider using a synonym to be more concise.
Context: ...n no time! This is a great solution for a lot of cases, but it requires the instructor t...
(A_LOT_OF)
[misspelling] ~19-~19: You can use ‘ever’ as an intensifier, but if the phrase is a pronoun or an adverb, use “wherever” without a space.
Context: ...k to unpack and drag to Applications or where ever you want to keep it. Navigate to a not...
(EVER_INTENSIFIER)
[style] ~25-~25: Using many exclamation marks might seem excessive (in this case: 4 exclamation marks for a text that’s 2045 characters long)
Context: ...ouble-click your notebooks to start them! ## Caveats * This only works on Macs ...
(EN_EXCESSIVE_EXCLAMATION)
[style] ~29-~29: The phrase ‘y’all’ is informal.
Context: ... right now (sorry Windows. Linux users, y'all chose this life.) * Every time you doub...
(Y_ALL)
🔇 Additional comments (18)
static/css/main.css (3)
8-13: Base typography and colors are well-defined
The system font stack, line-height, and color choices promote readability and cross-platform consistency. No changes needed here.
68-73: Grid‐based homepage layout is solid
The two-column grid with a sticky sidebar provides a clear, responsive structure. Implementation follows modern CSS practices.
281-287: Code block styling is effective
Background, padding, overflow-x, and border styles combine to create a readable code block experience. No issues detected.content/talks/_index.md (1)
1-4: Front matter is correctly structured
Thetitleandlayoutfields align with Hugo conventions and will render the list template as expected.content/publications/_index.md (1)
1-4: Front matter is correctly structured
Thetitleandlayoutdeclarations follow Hugo best practices.content/teaching/_index.md (1)
1-4: Front matter is correctly structured
Thetitleandlayoutfields comply with Hugo conventions and will trigger the list template.content/portfolio/_index.md (1)
1-4: Front matter is correctly structured
titleandlayoutare defined appropriately for a Hugo list page.content/cv.md (2)
1-3: Front matter structure looks good
The YAML front matter correctly defines the title and will integrate this page into your Hugo site navigation.
5-5: Use an absolute static path for the PDF
To ensure the PDF resolves correctly after Hugo builds the site, placeBenDichterCV.pdfinstatic/files/and reference it with an absolute URL, e.g.:<embed src="/files/BenDichterCV.pdf" width="800px" height="2100px" />content/publications/2009-10-01-paper-title-number-1.md (1)
1-7: Front matter is well-formed
Metadata fields (title,date,venue,paperurl,excerpt) are correctly specified and will integrate seamlessly with your Hugo list and single templates.content/portfolio/portfolio-1.md (1)
1-4: Front matter is valid
Thetitleandexcerptfields are correctly defined, and this will render properly in your Hugo portfolio list.content/teaching/2015-spring-teaching-2.md (1)
1-7: Front matter structure is correct
Metadata (title,type,venue,date,location) is properly defined for your Hugo teaching templates.content/portfolio/portfolio-2.md (1)
1-4: Front matter is correct
Thetitleandexcerptmetadata are properly set for your Hugo portfolio section.layouts/index.html (1)
18-20: Verify Bluesky profile URL formatYou build the Bluesky link as
https://{{ .Site.Params.bluesky }}. If.Site.Params.blueskyis just a username, you may need the full path (e.g.,https://bsky.app/profile/{{ .Site.Params.bluesky }}). Please confirm the parameter value or adjust the template accordingly.layouts/_default/baseof.html (4)
1-9: Well-structured document head
Dynamic page titles, meta description, and author tags are correctly configured. Great use of.IsHometo handle home vs. inner pages.
22-27: Static assets linking is correct
CSS and favicon references userelURLas intended, ensuring correct paths in different deployment environments.
42-46: Main content block is appropriately structured
Using Hugo’sblock "main"ensures that child templates can inject or override page-specific content.
48-83: Footer author profile and social links
The conditional rendering of contact and social links, andsafeHTMLusage for the bio, are well-handled.
| title: "NWBWidgets: Interactive visualization of NWB files" | ||
| type: "Talk" | ||
| venue: "NWB Remote User Days 2020" | ||
| date: 2012-03-01 |
There was a problem hiding this comment.
Date mismatch in front matter. The date is set to 2012-03-01, which conflicts with the file name (2020-05-13) and the event year (2020). Please update it to the correct talk date.
- date: 2012-03-01
+ date: 2020-05-13📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| date: 2012-03-01 | |
| date: 2020-05-13 |
🤖 Prompt for AI Agents
In content/talks/2020-05-13-nwbwidgets-1.md at line 5, the date in the front
matter is incorrectly set to 2012-03-01, which conflicts with the file name and
event year 2020. Update the date field to 2020-05-13 to match the file name and
event date.
| Heading 1 | ||
| ====== | ||
|
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||
| Heading 2 | ||
| ====== | ||
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| Heading 3 | ||
| ====== |
There was a problem hiding this comment.
Correct heading syntax. Using ====== underlines for H2 and H3 will render them as H1. Hugo supports Setext: = for H1, - for H2, or ATX (#) for deeper levels. Please refactor:
- Heading 1
- ======
-
- Heading 2
- ======
-
- Heading 3
- ======
+ # Heading 1
+
+ ## Heading 2
+
+ ### Heading 3📝 Committable suggestion
‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.
| Heading 1 | |
| ====== | |
| Heading 2 | |
| ====== | |
| Heading 3 | |
| ====== | |
| # Heading 1 | |
| ## Heading 2 | |
| ### Heading 3 |
🤖 Prompt for AI Agents
In content/teaching/2014-spring-teaching-1.md around lines 11 to 18, the
headings use `======` underlines which render all as H1 in Hugo. Replace the
`======` underline under the second heading with `------` to make it H2, and for
the third heading, use either `------` for H2 or switch to ATX style with `###`
for H3. Adjust the underline characters or switch to `#` notation to correctly
reflect heading levels.
hugo.toml
Outdated
| baseURL = "https://bendichter.com" | ||
| languageCode = "en-us" | ||
| title = "Ben Dichter" | ||
| theme = "" |
There was a problem hiding this comment.
Set a valid theme name
The theme field is empty. Hugo needs this to match your theme directory (e.g. "academic"). Without it, the site will render unstyled:
theme = "your-theme-folder-name"🤖 Prompt for AI Agents
In hugo.toml at line 4, the theme field is currently empty, which causes the
site to render without styles. Set the theme field to the exact name of your
theme directory by replacing the empty string with your theme folder name, for
example, theme = "academic".
| [outputs] | ||
| home = ["HTML", "RSS"] | ||
| page = ["HTML"] | ||
| section = ["HTML", "RSS"] | ||
|
|
There was a problem hiding this comment.
Define tag taxonomies for tag pages
You render tags in templates, but Hugo won’t build /tags/ pages without taxonomy definitions. Add:
[taxonomies]
tag = "tags"Otherwise, /tags/… URLs will 404.
🤖 Prompt for AI Agents
In hugo.toml around lines 53 to 57, the configuration lacks a taxonomy
definition for tags, which causes Hugo to not generate /tags/ pages and results
in 404 errors. Add a [taxonomies] section with tag = "tags" to define the tag
taxonomy properly, enabling Hugo to build the tag pages and serve URLs under
/tags/.
| # Social links | ||
| github = "bendichter" | ||
| twitter = "BenDichter" | ||
| bluesky = "bendichter.com" | ||
| orcid = "http://orcid.org/0000-0001-5725-6910" | ||
| pubmed = "https://pubmed.ncbi.nlm.nih.gov/?term=Dichter+B&cauthor_id=28269552" | ||
| googlescholar = "https://scholar.google.com/citations?user=_IwI_oEAAAAJ" | ||
| stackoverflow = "2559070/ben-dichter" | ||
|
|
There was a problem hiding this comment.
🛠️ Refactor suggestion
Correct social link formats
Some profiles are missing full URLs:
blueskyshould behttps://bsky.social/bendichterstackoverflowshould behttps://stackoverflow.com/users/2559070/ben-dichter
Update these fields to avoid broken links.
🤖 Prompt for AI Agents
In hugo.toml around lines 13 to 21, the social links for bluesky and
stackoverflow are not using full URLs, which can cause broken links. Update the
bluesky field to "https://bsky.social/bendichter" and the stackoverflow field to
"https://stackoverflow.com/users/2559070/ben-dichter" to ensure the links are
complete and functional.
| {{ $recent := (where .Site.RegularPages "Section" "posts") | first 3 }} | ||
| {{ if $recent }} | ||
| <section class="recent-posts"> | ||
| <h2>Recent Posts</h2> | ||
| <div class="posts-list"> | ||
| {{ range $recent }} |
There was a problem hiding this comment.
🛠️ Refactor suggestion
Ensure consistent sorting of recent posts
The current pipeline:
{{ $recent := (where .Site.RegularPages "Section" "posts") | first 3 }}may not always yield the newest posts. To guarantee the three most recent by date, add an explicit sort:
{{ $recent := where .Site.RegularPages "Section" "posts" | sort "Date" "desc" | first 3 }}🤖 Prompt for AI Agents
In layouts/index.html around lines 39 to 44, the recent posts are selected
without sorting, which may not reliably show the newest posts. Modify the
pipeline to first filter pages in the "posts" section, then sort them by the
"Date" field in descending order, and finally select the first three. Replace
the current assignment of $recent with one that includes the sort step before
taking the first 3 posts.
…tion The empty theme = "" line was causing Hugo to look for a non-existent module. Since custom layouts are used, no theme specification is needed. Co-authored-by: bendichter <[email protected]>
Migrated academic personal website from Jekyll to Hugo static site generator.
Changes
Closes #19
🤖 Generated with Claude Code
Summary by CodeRabbit