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adding easyconfigs: pyMBE-0.8.0-foss-2023b.eb
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easyblock = 'PythonBundle' | ||
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name = 'pyMBE' | ||
version = '0.8.0' | ||
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homepage = '' | ||
description = """pyMBE: the Python-based Molecule Builder for ESPResSo | ||
pyMBE provides tools to facilitate building up molecules with complex architectures | ||
in the Molecular Dynamics software ESPResSo.""" | ||
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toolchain = {'name': 'foss', 'version': '2023b'} | ||
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builddependencies = [('hatchling', '1.18.0')] | ||
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dependencies = [ | ||
('Python', '3.11.5'), | ||
('SciPy-bundle', '2023.11'), | ||
('Pint', '0.24'), | ||
('tqdm', '4.66.2'), | ||
('matplotlib', '3.8.2'), | ||
('ESPResSo', '4.2.2'), | ||
] | ||
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use_pip = True | ||
# pyMBE is not installable and should just be copied to the installation directory | ||
exts_classmap = {'pyMBE': 'Tarball'} | ||
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# pyMBE itself should be the first one in the list, | ||
# otherwise the Tarball easyblock will copy the sources of all extensions to the installation directory | ||
exts_list = [ | ||
(name, version, { | ||
'source_urls': ['https://github.com/pyMBE-dev/pyMBE/archive/'], | ||
'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}], | ||
'checksums': ['f143ae655b477d6d2ab6d97190a387fa9c7e854502a38c72c24eac48e37ea663'], | ||
}), | ||
('looseversion', '1.1.2', { | ||
'checksums': ['94d80bdbd0b6d57c11b886147ba1601f7d1531571621b81933b34537cbe469ad'], | ||
}), | ||
('mmtf-python', '1.1.3', { | ||
'modulename': 'mmtf', | ||
'checksums': ['12a02fe1b7131f0a2b8ce45b46f1e0cdd28b9818fe4499554c26884987ea0c32'], | ||
}), | ||
('Pint-Pandas', '0.5', { | ||
'checksums': ['48ec96d457f802a347763dee1d3e1a273f11f90e4e595df17fd44613dd14a61c'], | ||
}), | ||
('biopandas', '0.5.1.dev0', { | ||
'checksums': ['6dc9de631babf8221c1ac60230133717039e08911f15e8ac48498c787022de12'], | ||
}), | ||
] | ||
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sanity_check_paths = { | ||
'files': ['pyMBE.py'], | ||
'dirs': ['figs', 'lib', 'maintainer', 'parameters', 'refs', 'samples', 'testsuite', 'tutorials', 'visualization'], | ||
} | ||
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sanity_check_commands = [ | ||
'python -c "import pyMBE"', | ||
# running the full test suite takes a long time, so just stick to the unit tests | ||
'cd %(installdir)s && make unit_tests' | ||
] | ||
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modextrapaths = {'PYTHONPATH': ['.']} | ||
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moduleclass = 'chem' |