Merge pull request #273 from bcgsc/feature/DEVSU-2038-add-cancer_gene…

…-to-gene feature/DEVSU-2038-add-cancer_gene-to-gene
bcgsc · Oct 13, 2023 · 66a8ea7 · 66a8ea7
2 parents c0d436e + 124d6db
commit 66a8ea7
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Showing 3 changed files with 27 additions and 1 deletion.
diff --git a/app/models/reports/genes.js b/app/models/reports/genes.js
@@ -31,6 +31,10 @@ module.exports = (sequelize, Sq) => {
       type: Sq.BOOLEAN,
       defaultValue: false,
     },
+    cancerGene: {
+      field: 'cancer_gene',
+      type: Sq.BOOLEAN,
+    },
     cancerRelated: {
       name: 'cancerRelated',
       field: 'cancer_related',

diff --git a/migrations/20231012213005-DEVSU-2038-add-cancer_gene-to-gene.js b/migrations/20231012213005-DEVSU-2038-add-cancer_gene-to-gene.js
@@ -0,0 +1,20 @@
+const TABLE = 'reports_genes';
+
+module.exports = {
+  up: async (queryInterface, Sq) => {
+    return queryInterface.sequelize.transaction(async (transaction) => {
+      await queryInterface.addColumn(
+        TABLE,
+        'cancer_gene',
+        {
+          type: Sq.BOOLEAN,
+        },
+        {transaction},
+      );
+    });
+  },
+
+  down: async () => {
+    throw new Error('Not Implemented!');
+  },
+};
diff --git a/test/routes/report/gene.test.js b/test/routes/report/gene.test.js
@@ -19,6 +19,7 @@ const GENE_DATA = {
   knownFusionPartner: true,
   therapeuticAssociated: true,
   knownSmallMutation: true,
+  cancerGene: true,
 };
 
 const GENE_UPDATE_DATA = {
@@ -30,12 +31,13 @@ const GENE_UPDATE_DATA = {
   knownFusionPartner: false,
   therapeuticAssociated: false,
   knownSmallMutation: false,
+  cancerGene: false,
 };
 
 const geneProperties = [
   'ident', 'createdAt', 'name', 'tumourSuppressor', 'oncogene',
   'cancerRelated', 'drugTargetable', 'knownFusionPartner',
-  'therapeuticAssociated', 'knownSmallMutation',
+  'therapeuticAssociated', 'knownSmallMutation', 'cancerGene',
 ];
 
 const checkGene = (geneObject) => {