About PyBoolNet

PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks. The accompanying paper was published with Bioinformatics and is available at

• https://doi.org/10.1093/bioinformatics/btw682

For report bugs, request features and give feedback at issues or contact

• [email protected] (developer)
• [email protected]

Documentation

The documentation and tutorials are hosted here:

• https://pyboolnet.readthedocs.io/

Model Repository

For examples of attractors, basins and phenotypes, browse the model repository here:

• PyBoolNet/Repository

Installation

To install the PyBoolNet master branch use:

pip3 install pip --upgrade
pip3 install git+https://github.com/hklarner/PyBoolNet

To install a tagged version use the @:

pip3 install pip --upgrade
pip3 install git+https://github.com/hklarner/[email protected]

For release notes, see

• PyBoolNet/RELEASENOTES.md

Contributions

• send pull requests to the develop branch
• add tests to PyBoolNet/tests/