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Add ZTF alerts notebook #479

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Add ZTF alerts notebook #479

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@hombit hombit commented Oct 31, 2024

Add pre-executed notebook with "Alerce" data.

Rendered doc: https://lsdb--479.org.readthedocs.build/en/479/tutorials/pre_executed/ztf-alerts-sne.html

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github-actions bot commented Oct 31, 2024

Before [b7f8127] <v0.4.1> After [ee3a113] Ratio Benchmark (Parameter)
32.8±0.8ms 34.2±0.8ms 1.04 benchmarks.time_polygon_search
106±2ms 108±1ms 1.02 benchmarks.time_kdtree_crossmatch
17.8±0.3ms 17.9±0.3ms 1.01 benchmarks.time_box_filter_on_partition
14.3±0.04s 14.5±0.1s 1.01 benchmarks.time_create_large_catalog
2.16±0.02s 2.16±0.01s 1 benchmarks.time_create_midsize_catalog

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codecov bot commented Oct 31, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 97.67%. Comparing base (b7f8127) to head (3461aa1).

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@@           Coverage Diff           @@
##             main     #479   +/-   ##
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  Coverage   97.67%   97.67%           
=======================================
  Files          39       39           
  Lines        1546     1546           
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  Hits         1510     1510           
  Misses         36       36           

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"# Search for SN-like light curves in ZTF alerts\n",
"\n",
"We will use lsdb package to load a Hats catalog with [ZTF](https://www.ztf.caltech.edu) alerts.\n",
"The dataset contains all alerts sent from the beginning of the survey until 2023-09-13 corresponding to objects having at least 20 detections.\n",
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Do you know when was the beginning of the survey?

"source": [
"# Search for SN-like light curves in ZTF alerts\n",
"\n",
"We will use lsdb package to load a Hats catalog with [ZTF](https://www.ztf.caltech.edu) alerts.\n",
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Hats -> HATS

"source": [
"### Helper function for light-curve plotting\n",
"\n",
"The function accepts a pandas data frame and plot a light curve."
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plot -> plots

"These transformed columns are \"nested data frames\", so each item could be represented by a small pandas dataframe.\n",
"We are going to have three nested columns:\n",
"\n",
"1. \"lc\", for light curves, each point corrersponds to some alert (detection)\n",
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corresponds -> corresponding

"2. \"nondet\", for non-detections (upper limits)\n",
"3. \"ref\", for ZTF reference objects associated with alerts\n",
"\n",
"Here we do not download any data yet, all data access and analysis happens only after `.compute()` is called.\n",
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Here we have not downloaded ....

" <td>...</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3458764513820540928</th>\n",
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It is super confusing that these two catalogs have the same name

{
"attachments": {
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These images render very big for me, much bigger than they should be

{
"attachments": {
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we dont have any way to monitor the downloading progress, do we?

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