Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

added threading and Colabfold-like plots generation #442

Open
wants to merge 64 commits into
base: main
Choose a base branch
from
Open

added threading and Colabfold-like plots generation #442

wants to merge 64 commits into from

Commits on Apr 17, 2024

  1. added multithread to colabfold search

    @jflucier
    jflucier committed Apr 17, 2024
    Configuration menu
    Copy the full SHA
    896d586 View commit details
    Browse the repository at this point in the history

  2. added multithread to colabfold search

    @jflucier
    jflucier committed Apr 17, 2024
    Configuration menu
    Copy the full SHA
    17e3b93 View commit details
    Browse the repository at this point in the history

  3. added multithread to colabfold search

    @jflucier
    jflucier committed Apr 17, 2024
    Configuration menu
    Copy the full SHA
    573623d View commit details
    Browse the repository at this point in the history

Commits on Apr 22, 2024

  1. trying to run

    @jflucier
    jflucier committed Apr 22, 2024
    Configuration menu
    Copy the full SHA
    d256af3 View commit details
    Browse the repository at this point in the history

Commits on Apr 23, 2024

  1. tests

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    89c0164 View commit details
    Browse the repository at this point in the history

  2. tests

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    acb0dcc View commit details
    Browse the repository at this point in the history

  3. tests

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    e8fa8d2 View commit details
    Browse the repository at this point in the history

  4. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    93caf7e View commit details
    Browse the repository at this point in the history

  5. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    dd6f9bc View commit details
    Browse the repository at this point in the history

  6. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    bfb2cac View commit details
    Browse the repository at this point in the history

  7. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    be45f53 View commit details
    Browse the repository at this point in the history

  8. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    f256b4b View commit details
    Browse the repository at this point in the history

  9. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    ec7f765 View commit details
    Browse the repository at this point in the history

  10. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    e995a1a View commit details
    Browse the repository at this point in the history

  11. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    5ba5334 View commit details
    Browse the repository at this point in the history

  12. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    00d6f66 View commit details
    Browse the repository at this point in the history

  13. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    4eaf57d View commit details
    Browse the repository at this point in the history

  14. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    752aa79 View commit details
    Browse the repository at this point in the history

  15. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    6454eb3 View commit details
    Browse the repository at this point in the history

  16. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    866ca58 View commit details
    Browse the repository at this point in the history

  17. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    126cb22 View commit details
    Browse the repository at this point in the history

  18. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    875246b View commit details
    Browse the repository at this point in the history

  19. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    2dea90f View commit details
    Browse the repository at this point in the history

  20. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    25fc5a4 View commit details
    Browse the repository at this point in the history

  21. test

    @jflucier
    jflucier committed Apr 23, 2024
    Configuration menu
    Copy the full SHA
    3ad997f View commit details
    Browse the repository at this point in the history

Commits on Apr 25, 2024

  1. added logging

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    220e1ce View commit details
    Browse the repository at this point in the history

  2. added logging

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    3c35fb4 View commit details
    Browse the repository at this point in the history

  3. added logging

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    2b2db7c View commit details
    Browse the repository at this point in the history

  4. added QC plot script

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    d377bc4 View commit details
    Browse the repository at this point in the history

  5. patch plot script

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    14a329d View commit details
    Browse the repository at this point in the history

  6. patch plot script

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    b1e4a84 View commit details
    Browse the repository at this point in the history

  7. patch to save feature dict in pickle for post plots

    @jflucier
    jflucier committed Apr 25, 2024
    Configuration menu
    Copy the full SHA
    b4d5a08 View commit details
    Browse the repository at this point in the history

Commits on Apr 26, 2024

  1. patch to save feature dict in pickle for post plots

    @jflucier
    jflucier committed Apr 26, 2024
    Configuration menu
    Copy the full SHA
    6c4e80a View commit details
    Browse the repository at this point in the history

  2. start

    @jflucier
    jflucier committed Apr 26, 2024
    Configuration menu
    Copy the full SHA
    9fc31ef View commit details
    Browse the repository at this point in the history

Commits on Apr 29, 2024

  1. plots generation scripts

    @jflucier
    jflucier committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    21d1c9b View commit details
    Browse the repository at this point in the history

  2. change input param for coverage

    @jflucier
    jflucier committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    ee207c4 View commit details
    Browse the repository at this point in the history

  3. patch

    @jflucier
    jflucier committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    1a410ec View commit details
    Browse the repository at this point in the history

  4. patch

    @jflucier
    jflucier committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    68d1e6b View commit details
    Browse the repository at this point in the history

  5. unrecon fonts

    @jflucier
    jflucier committed Apr 29, 2024
    Configuration menu
    Copy the full SHA
    9812856 View commit details
    Browse the repository at this point in the history

Commits on May 1, 2024

  1. patch for feature dict pickle output

    @jflucier
    jflucier committed May 1, 2024
    Configuration menu
    Copy the full SHA
    322f74c View commit details
    Browse the repository at this point in the history

  2. gen pae json output

    @jflucier
    jflucier committed May 1, 2024
    Configuration menu
    Copy the full SHA
    30bd52b View commit details
    Browse the repository at this point in the history

  3. gen pae json output

    @jflucier
    jflucier committed May 1, 2024
    Configuration menu
    Copy the full SHA
    df5884a View commit details
    Browse the repository at this point in the history

  4. gen pae json output

    @jflucier
    jflucier committed May 1, 2024
    Configuration menu
    Copy the full SHA
    de95dda View commit details
    Browse the repository at this point in the history

Commits on May 3, 2024

  1. export json like colabfold

    @jflucier
    jflucier committed May 3, 2024
    Configuration menu
    Copy the full SHA
    03d24f2 View commit details
    Browse the repository at this point in the history

Commits on May 8, 2024

  1. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    bdfda8f View commit details
    Browse the repository at this point in the history

  2. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    6974cff View commit details
    Browse the repository at this point in the history

  3. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    45ac61b View commit details
    Browse the repository at this point in the history

  4. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    79464ce View commit details
    Browse the repository at this point in the history

  5. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    cb359fd View commit details
    Browse the repository at this point in the history

  6. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    c09e7a8 View commit details
    Browse the repository at this point in the history

  7. debug hhsearch

    @jflucier
    jflucier committed May 8, 2024
    Configuration menu
    Copy the full SHA
    c549f8e View commit details
    Browse the repository at this point in the history

Commits on May 9, 2024

  1. colabsearch integration

    @jflucier
    jflucier committed May 9, 2024
    Configuration menu
    Copy the full SHA
    6717ee6 View commit details
    Browse the repository at this point in the history

Commits on May 13, 2024

  1. gen plots new version

    @jflucier
    jflucier committed May 13, 2024
    Configuration menu
    Copy the full SHA
    6abf48f View commit details
    Browse the repository at this point in the history

Commits on May 14, 2024

  1. add table to pae plot

    @jflucier
    jflucier committed May 14, 2024
    Configuration menu
    Copy the full SHA
    60a0b8b View commit details
    Browse the repository at this point in the history

  2. split json creation from plot script

    @jflucier
    jflucier committed May 14, 2024
    Configuration menu
    Copy the full SHA
    c4e1400 View commit details
    Browse the repository at this point in the history

  3. split json creation from plot script

    @jflucier
    jflucier committed May 14, 2024
    Configuration menu
    Copy the full SHA
    9e9dd62 View commit details
    Browse the repository at this point in the history

  4. split json creation from plot script

    @jflucier
    jflucier committed May 14, 2024
    Configuration menu
    Copy the full SHA
    ceb056a View commit details
    Browse the repository at this point in the history

  5. split json creation from plot script

    @jflucier
    jflucier committed May 14, 2024
    Configuration menu
    Copy the full SHA
    ca54002 View commit details
    Browse the repository at this point in the history

Commits on Jul 19, 2024

  1. improve exception messages

    @max-l
    max-l committed Jul 19, 2024
    Configuration menu
    Copy the full SHA
    f96ecea View commit details
    Browse the repository at this point in the history

Commits on Jul 23, 2024

  1. patch to display multimer seq limit in plots

    @jflucier
    jflucier committed Jul 23, 2024
    Configuration menu
    Copy the full SHA
    2dbf243 View commit details
    Browse the repository at this point in the history

  2. patch to display multimer seq limit in plots

    @jflucier
    jflucier committed Jul 23, 2024
    Configuration menu
    Copy the full SHA
    22f1ebb View commit details
    Browse the repository at this point in the history

  3. patch to display multimer seq limit in plots

    @jflucier
    jflucier committed Jul 23, 2024
    Configuration menu
    Copy the full SHA
    ae77037 View commit details
    Browse the repository at this point in the history

  4. patch to display multimer seq limit in plots

    @jflucier
    jflucier committed Jul 23, 2024
    Configuration menu
    Copy the full SHA
    7ff67eb View commit details
    Browse the repository at this point in the history

  5. patch to display multimer seq limit in plots

    @jflucier
    jflucier committed Jul 23, 2024
    Configuration menu
    Copy the full SHA
    724db4e View commit details
    Browse the repository at this point in the history