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tfcollins committed Nov 14, 2024
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4 changes: 2 additions & 2 deletions master/_sources/reference.md.txt
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# Advanced API Reference
# API Reference

Advanced API Reference for Genalyzer library. This API is meant for advanced users who want to use the library functions for more complex tasks.
API Reference for Genalyzer library.

## Table of Contents

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| Option | Description | Default |
| ------ | ----------- | ------- |
| `PYTHON_BINDINGS` | Build the Python bindings | `OFF` |
| `BUILD_DOC` | Build the documentation | `OFF` |
| `BUILD_TESTS_EXAMPLES` | Build the tests and examples | `OFF` |
| `COVERAGE` | Enable coverage tracing when testing | `OFF` |
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<li class="toctree-l1"><a class="reference internal" href="../introduction.html">Introduction</a></li>
<li class="toctree-l1"><a class="reference internal" href="../setup.html">Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="../spectral_analysis.html">Spectral Analysis</a></li>
<li class="toctree-l1"><a class="reference internal" href="../reference.html">Advanced API Reference</a></li>
<li class="toctree-l1"><a class="reference internal" href="../reference.html">API Reference</a></li>
<li class="toctree-l1"><a class="reference internal" href="../reference_simplified.html">(Beta) Simplified API Reference</a></li>
<li class="toctree-l1 has-children"><a class="reference internal" href="../python/genalyzer.html">Python Bindings</a><input class="toctree-checkbox" id="toctree-checkbox-1" name="toctree-checkbox-1" role="switch" type="checkbox"/><label for="toctree-checkbox-1"><div class="visually-hidden">Toggle navigation of Python Bindings</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul>
<li class="toctree-l2 has-children"><a class="reference internal" href="../python/pygenalyzer.html">pygenalizer</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" role="switch" type="checkbox"/><label for="toctree-checkbox-2"><div class="visually-hidden">Toggle navigation of pygenalizer</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul>
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4 changes: 2 additions & 2 deletions master/index.html
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<li class="toctree-l1"><a class="reference internal" href="introduction.html">Introduction</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="spectral_analysis.html">Spectral Analysis</a></li>
<li class="toctree-l1"><a class="reference internal" href="reference.html">Advanced API Reference</a></li>
<li class="toctree-l1"><a class="reference internal" href="reference.html">API Reference</a></li>
<li class="toctree-l1"><a class="reference internal" href="reference_simplified.html">(Beta) Simplified API Reference</a></li>
<li class="toctree-l1 has-children"><a class="reference internal" href="python/genalyzer.html">Python Bindings</a><input class="toctree-checkbox" id="toctree-checkbox-1" name="toctree-checkbox-1" role="switch" type="checkbox"/><label for="toctree-checkbox-1"><div class="visually-hidden">Toggle navigation of Python Bindings</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul>
<li class="toctree-l2 has-children"><a class="reference internal" href="python/pygenalyzer.html">pygenalizer</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" role="switch" type="checkbox"/><label for="toctree-checkbox-2"><div class="visually-hidden">Toggle navigation of pygenalizer</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul>
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<li class="toctree-l2"><a class="reference internal" href="spectral_analysis.html#run-spectral-analysis">Run Spectral Analysis</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="reference.html">Advanced API Reference</a><ul>
<li class="toctree-l1"><a class="reference internal" href="reference.html">API Reference</a><ul>
<li class="toctree-l2"><a class="reference internal" href="reference.html#table-of-contents">Table of Contents</a></li>
<li class="toctree-l2"><a class="reference internal" href="reference.html#enumerations">Enumerations</a></li>
<li class="toctree-l2"><a class="reference internal" href="reference.html#api-utilities">API Utilities</a></li>
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<li class="toctree-l1 current current-page"><a class="current reference internal" href="#">Introduction</a></li>
<li class="toctree-l1"><a class="reference internal" href="setup.html">Installation</a></li>
<li class="toctree-l1"><a class="reference internal" href="spectral_analysis.html">Spectral Analysis</a></li>
<li class="toctree-l1"><a class="reference internal" href="reference.html">Advanced API Reference</a></li>
<li class="toctree-l1"><a class="reference internal" href="reference.html">API Reference</a></li>
<li class="toctree-l1"><a class="reference internal" href="reference_simplified.html">(Beta) Simplified API Reference</a></li>
<li class="toctree-l1 has-children"><a class="reference internal" href="python/genalyzer.html">Python Bindings</a><input class="toctree-checkbox" id="toctree-checkbox-1" name="toctree-checkbox-1" role="switch" type="checkbox"/><label for="toctree-checkbox-1"><div class="visually-hidden">Toggle navigation of Python Bindings</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul>
<li class="toctree-l2 has-children"><a class="reference internal" href="python/pygenalyzer.html">pygenalizer</a><input class="toctree-checkbox" id="toctree-checkbox-2" name="toctree-checkbox-2" role="switch" type="checkbox"/><label for="toctree-checkbox-2"><div class="visually-hidden">Toggle navigation of pygenalizer</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul>
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