Code

Develop#120

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CChahrour merged 17 commits intomasteralsmith151/SeqNado:masterfrom developalsmith151/SeqNado:developCopy head branch name to clipboardJan 26, 2024

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Commits

Commits on Jan 24, 2024

• Fix slurm preset (#118)

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Commits on Jan 25, 2024

• Delete setup.cfg file

  alsmith151

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  1a637c1

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• fix: split peak call rules

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  ce2a8a5

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• tests: added all peak call methods to atac test

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• Update output file paths in

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• Update file paths in hub.smk

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• fix: updated wildcards for bigBed files

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  2ad12a7

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• Refactor test_seqnado_config_creation function and

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• Update config file for chip sequencing

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• fix: seqnado-design

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• chore: removed commented code

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• Fix file path in lanceotron_no_input rule

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• Fix metadata and experiment creation in DesignIP

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• Fix symlink_files function to handle both paired

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• Add log and wrapper for fastqc_raw_single rule

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• update config if ucsc is null

  CChahrour

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Commits on Jan 26, 2024

• Fix config (#119)

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