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simplify bmrc profile
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CChahrour committed Nov 9, 2023
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cluster-sidecar: "slurm-sidecar.py"
cluster-cancel: "scancel"
jobname: smk-{jobid}-{rule}-{wildcards}
restart-times: "0"
jobscript: "slurm-jobscript.sh"
cluster: "slurm-submit.py"
cluster-status: "slurm-status.py"
max-jobs-per-second: "10"
max-status-checks-per-second: "10"
local-cores: 1
latency-wait: "5"
use-conda: "False"
use-singularity: "True"
singularity-args: -B /well -B /exafs1
singularity-args: -B /well -B /exafs1
jobs: "50"
printshellcmds: "True"
rerun-incomplete: "True"
keep-going: "True"
retries: "3"


# Example resource configuration
# default-resources:
# - runtime=100
# - mem_mb=6000
# - disk_mb=1000000
# # set-threads: map rule names to threads
# set-threads:
# - single_core_rule=1
# - multi_core_rule=10
# # set-resources: map rule names to resources in general
# set-resources:
# - high_memory_rule:mem_mb=12000
# - long_running_rule:runtime=1200

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