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change config file ext to yml Python package #419: Commit 9881884 pushed by CChahrour
January 9, 2024 17:48 2m 29s feature/chip_spikein
feature/chip_spikein
January 9, 2024 17:48 2m 29s
add deseq2 template Python package #418: Commit 9f61c63 pushed by CChahrour
January 9, 2024 17:33 2m 18s feature/chip_spikein
feature/chip_spikein
January 9, 2024 17:33 2m 18s
changed config to jinja2 Python package #417: Commit b527f67 pushed by CChahrour
January 9, 2024 17:15 2m 42s feature/chip_spikein
feature/chip_spikein
January 9, 2024 17:15 2m 42s
change heatmap to scale regions and add metaplot Python package #416: Commit 8865073 pushed by CChahrour
January 8, 2024 13:40 7m 36s feature/chip_spikein
feature/chip_spikein
January 8, 2024 13:40 7m 36s
Fix fastqc_dir path in qc.smk Python package #415: Commit 4387d4b pushed by alsmith151
January 4, 2024 19:05 3m 20s feat-update-fastq-class
feat-update-fastq-class
January 4, 2024 19:05 3m 20s
Fix file path and symlink issues Python package #414: Commit 334b4d7 pushed by alsmith151
January 4, 2024 18:28 2m 34s feat-update-fastq-class
feat-update-fastq-class
January 4, 2024 18:28 2m 34s
Add QC reports for different stages of the Python package #413: Commit 3470616 pushed by alsmith151
January 4, 2024 13:16 3m 20s feat-update-fastq-class
feat-update-fastq-class
January 4, 2024 13:16 3m 20s
Refactor fastqc rule and add wrapper for Python package #412: Commit 12a3a6b pushed by alsmith151
January 4, 2024 12:54 2m 27s feat-update-fastq-class
feat-update-fastq-class
January 4, 2024 12:54 2m 27s
fix scaling factors for deeptools Python package #411: Commit ddecdfc pushed by CChahrour
January 4, 2024 01:01 9m 34s feature/chip_spikein
feature/chip_spikein
January 4, 2024 01:01 9m 34s
fix fastqscreen to run Python package #410: Commit 9334d29 pushed by CChahrour
January 4, 2024 00:54 9m 18s feature/chip_spikein
feature/chip_spikein
January 4, 2024 00:54 9m 18s
add rx to chip as an option Python package #409: Commit 7413bf1 pushed by CChahrour
January 4, 2024 00:35 7m 57s feature/chip_spikein
feature/chip_spikein
January 4, 2024 00:35 7m 57s
amended norm to orlando method Python package #408: Commit 67f01ec pushed by CChahrour
January 3, 2024 23:45 13m 29s feature/chip_spikein
feature/chip_spikein
January 3, 2024 23:45 13m 29s
split with samtools Python package #407: Commit 217d90c pushed by CChahrour
January 3, 2024 18:54 10m 31s feature/chip_spikein
feature/chip_spikein
January 3, 2024 18:54 10m 31s
add split_bam.py Python package #406: Commit 2b02f29 pushed by CChahrour
January 3, 2024 15:49 10m 40s feature/chip_spikein
feature/chip_spikein
January 3, 2024 15:49 10m 40s
Update fastq_trim.smk workflow rules Python package #405: Commit a2b0443 pushed by alsmith151
January 3, 2024 15:38 2m 40s feat-update-fastq-class
feat-update-fastq-class
January 3, 2024 15:38 2m 40s
Add new test files and update .gitignore Python package #404: Commit b511728 pushed by alsmith151
January 3, 2024 13:25 3m 7s develop
develop
January 3, 2024 13:25 3m 7s
add chip ref norm with concat genome Python package #403: Commit 790fd52 pushed by CChahrour
January 2, 2024 15:59 10m 6s feature/chip_spikein
feature/chip_spikein
January 2, 2024 15:59 10m 6s
simplify bmrc profile Python package #402: Commit e66888f pushed by CChahrour
November 9, 2023 19:00 11m 7s bmrc
bmrc
November 9, 2023 19:00 11m 7s
back to short q Python package #401: Commit 50071bd pushed by CChahrour
November 9, 2023 17:23 11m 25s bmrc
bmrc
November 9, 2023 17:23 11m 25s
bmrc queue fix Python package #400: Commit 0ddb72e pushed by CChahrour
November 9, 2023 17:19 11m 14s bmrc
bmrc
November 9, 2023 17:19 11m 14s
indent error Python package #399: Commit 084fb2c pushed by CChahrour
November 9, 2023 16:55 20m 44s bmrc
bmrc
November 9, 2023 16:55 20m 44s
update bmrc mounting Python package #398: Commit a33b727 pushed by CChahrour
November 9, 2023 16:53 2m 16s bmrc
bmrc
November 9, 2023 16:53 2m 16s
update bmrc profile Python package #397: Commit 610cc21 pushed by CChahrour
November 9, 2023 16:53 2m 26s bmrc
bmrc
November 9, 2023 16:53 2m 26s
add bmrc profile to cli Python package #396: Commit 4f8c190 pushed by CChahrour
November 9, 2023 16:43 2m 25s bmrc
bmrc
November 9, 2023 16:43 2m 25s
fixes for profile for bmrc Python package #395: Commit f6999d2 pushed by CChahrour
November 9, 2023 16:32 11m 21s bmrc
bmrc
November 9, 2023 16:32 11m 21s
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