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Refactor Snakefiles to include SCALE_RESOURCES variable
Python package #1077: Commit 3810996 pushed by alsmith151
July 23, 2024 17:34 8m 19s feat-scale-resources
July 23, 2024 17:34 8m 19s
feat: Add option to scale memory and time resources for pipeline
Python package #1076: Commit 6b46e54 pushed by alsmith151
July 23, 2024 09:27 11m 7s feat-scale-resources
July 23, 2024 09:27 11m 7s
Refactor pileup_default.smk to use sorted BAM file for bedtools conve…
Python package #1075: Commit 6720440 pushed by alsmith151
July 15, 2024 12:28 20m 21s fix-seacr
July 15, 2024 12:28 20m 21s
add options from config into mapping rule
Python package #1073: Commit 8b92d2b pushed by CChahrour
July 6, 2024 08:30 16m 6s fix-spikein-mapping-options
July 6, 2024 08:30 16m 6s
increase resources for fragment
Python package #1072: Commit 28df5a8 pushed by CChahrour
July 6, 2024 08:22 2m 44s fix-seacr-sorting
July 6, 2024 08:22 2m 44s
filter bams for pp mapped reads for seacr
Python package #1071: Commit 45982ae pushed by CChahrour
June 28, 2024 17:19 4m 25s fix-seacr-sorting
June 28, 2024 17:19 4m 25s
sort by names
Python package #1070: Commit 9dedba7 pushed by CChahrour
June 28, 2024 16:39 4m 59s fix-seacr-sorting
June 28, 2024 16:39 4m 59s
revert to bedtools for seacr bedgraph
Python package #1069: Commit 356479b pushed by CChahrour
June 28, 2024 16:02 4m 19s fix-seacr-sorting
June 28, 2024 16:02 4m 19s
change bedgraph to bamcoverage
Python package #1068: Commit 2c14b79 pushed by CChahrour
June 28, 2024 15:42 5m 14s fix-seacr-sorting
June 28, 2024 15:42 5m 14s
add escape in awk
Python package #1067: Commit 4e9ff8e pushed by CChahrour
June 28, 2024 12:50 11m 40s fix-seacr-sorting
June 28, 2024 12:50 11m 40s
add sort by name for seacr
Python package #1066: Commit 822fd02 pushed by CChahrour
June 28, 2024 12:39 10m 31s fix-seacr-sorting
June 28, 2024 12:39 10m 31s
Merge develop with faster tests (#199)
Python package #1063: Commit 1b16906 pushed by CChahrour
June 4, 2024 15:43 12m 37s v0.5.2
June 4, 2024 15:43 12m 37s
check caching
Python package #1062: Commit 1b77ea3 pushed by CChahrour
May 31, 2024 15:18 11m 27s develop
May 31, 2024 15:18 11m 27s
Merge branch 'master' into develop
Python package #1061: Commit 7a6b7f3 pushed by CChahrour
May 31, 2024 14:54 13m 11s develop
May 31, 2024 14:54 13m 11s
Merge develop with faster tests (#199)
Python package #1060: Commit 1b16906 pushed by CChahrour
May 31, 2024 14:54 20m 48s master
May 31, 2024 14:54 20m 48s
Merge branch 'master' into develop
Python package #1059: Commit 7a6b7f3 pushed by CChahrour
May 31, 2024 14:47 12m 55s develop
May 31, 2024 14:47 12m 55s
merge error in workflow file
Python package #1058: Commit 14a65da pushed by CChahrour
May 31, 2024 14:39 18m 11s develop
May 31, 2024 14:39 18m 11s
Develop (#196)
Python package #1029: Commit f85fd9e pushed by CChahrour
May 31, 2024 01:48 22m 58s master
May 31, 2024 01:48 22m 58s