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@@ -4,3 +4,4 @@ __pycache__/* | |
dist/* | ||
build/* | ||
.tox/* | ||
*.pyc |
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--- | ||
time_started: 2017-04-21 15:57:44.341285 | ||
genetic_criterion_threshold: 0.1 | ||
abundance_criterion_threshold: 10.0 | ||
distribution_criterion_threshold: 0.0005 | ||
sequence_table_filename: /Users/scott/lib/dbotu/data/input/counts.txt | ||
fasta_filename: /Users/scott/lib/dbotu/data/input/seq.fa | ||
otu_table_output_filename: /Users/scott/lib/dbotu/data/output/otu.txt | ||
progress_log_output_filename: /Users/scott/lib/dbotu/data/output/log.txt | ||
membership_output_filename: /Users/scott/lib/dbotu/data/output/membership.txt | ||
debug_log_output_filename: /Users/scott/lib/dbotu/data/output/debug_log.txt | ||
time_started 2017-06-02 12:20:26.231840 | ||
genetic_criterion_threshold 0.1 | ||
abundance_criterion_threshold 10.0 | ||
distribution_criterion_threshold 0.0005 | ||
sequence_table_filename /Users/scott/lib/dbotu/data/input/counts.txt | ||
fasta_filename /Users/scott/lib/dbotu/data/input/seq.fa | ||
otu_table_output_filename /Users/scott/lib/dbotu/data/output/otu.txt | ||
progress_log_output_filename /Users/scott/lib/dbotu/data/output/log.txt | ||
membership_output_filename /Users/scott/lib/dbotu/data/output/membership.txt | ||
debug_log_output_filename /Users/scott/lib/dbotu/data/output/debug_log.txt | ||
--- | ||
- "seq106" | ||
- "seq53" | ||
- "seq86" | ||
- "seq89" | ||
- "seq118" | ||
- "seq0" | ||
- "seq7" | ||
- "seq47" | ||
- "seq17" | ||
- "seq67" | ||
- "seq38" | ||
- "seq87" | ||
- "seq62" | ||
- "seq50" | ||
- "seq60" | ||
- "seq48" | ||
- "seq93" | ||
- "seq34" | ||
- "seq110" | ||
- "seq65" | ||
- "seq6" | ||
- "seq79" | ||
- "seq85" | ||
- "seq72" | ||
- "seq28" | ||
- "seq91" | ||
- "seq109" | ||
- "seq96" | ||
- "seq74" | ||
- "seq10" | ||
- "seq71" | ||
- "seq75" | ||
- "seq76" | ||
- "seq84" | ||
- "seq108" | ||
- "seq13" | ||
- "seq78" | ||
- "seq44" | ||
- "seq9" | ||
- "seq113" | ||
- "seq57" | ||
- "seq8" | ||
- "seq12" | ||
- "seq64" | ||
- "seq63" | ||
- "seq56" | ||
- "seq25" | ||
- "seq31" | ||
- "seq92" | ||
- "seq29" | ||
- "seq95" | ||
- "seq82" | ||
- "seq20" | ||
- "seq15" | ||
- "seq54" | ||
- "seq21" | ||
- "seq80" | ||
- "seq27" | ||
- "seq99" | ||
- "seq102" | ||
- "seq5" | ||
- "seq112" | ||
- "seq2" | ||
- "seq43" | ||
- "seq24" | ||
- "seq14" | ||
- "seq49" | ||
- "seq41" | ||
- "seq94" | ||
- "seq68" | ||
- "seq77" | ||
- "seq52" | ||
- "seq37" | ||
- "seq104" | ||
- ["seq32", "seq84"] | ||
- ["seq40", "seq84"] | ||
- "seq3" | ||
- ["seq16", "seq84"] | ||
- ["seq103", "seq84"] | ||
- ["seq45", "seq84"] | ||
- ["seq55", "seq84"] | ||
- "seq58" | ||
- "seq30" | ||
- ["seq19", "seq84"] | ||
- "seq97" | ||
- "seq88" | ||
- ["seq115", "seq17"] | ||
- ["seq4", "seq64"] | ||
- "seq66" | ||
- ["seq73", "seq34"] | ||
- "seq1" | ||
- "seq22" | ||
- ["seq105", "seq34"] | ||
- ["seq11", "seq58"] | ||
- "seq70" | ||
- "seq18" | ||
- ["seq119", "seq109"] | ||
- "seq23" | ||
- ["seq83", "seq63"] | ||
- ["seq117", "seq84"] | ||
- ["seq116", "seq41"] | ||
- "seq114" | ||
- ["seq111", "seq110"] | ||
- ["seq107", "seq86"] | ||
- "seq101" | ||
- "seq100" | ||
- "seq98" | ||
- ["seq90", "seq29"] | ||
- ["seq81", "seq86"] | ||
- ["seq26", "seq30"] | ||
- ["seq69", "seq2"] | ||
- ["seq61", "seq15"] | ||
- ["seq51", "seq31"] | ||
- ["seq46", "seq63"] | ||
- ["seq42", "seq12"] | ||
- ["seq39", "seq14"] | ||
- ["seq36", "seq38"] | ||
- "seq35" | ||
- ["seq33", "seq17"] | ||
- ["seq59", "seq24"] | ||
seq106 | ||
seq53 | ||
seq86 | ||
seq89 | ||
seq118 | ||
seq0 | ||
seq7 | ||
seq47 | ||
seq17 | ||
seq67 | ||
seq38 | ||
seq87 | ||
seq62 | ||
seq50 | ||
seq60 | ||
seq48 | ||
seq93 | ||
seq34 | ||
seq110 | ||
seq65 | ||
seq6 | ||
seq79 | ||
seq85 | ||
seq72 | ||
seq28 | ||
seq91 | ||
seq109 | ||
seq96 | ||
seq74 | ||
seq10 | ||
seq71 | ||
seq75 | ||
seq76 | ||
seq84 | ||
seq108 | ||
seq13 | ||
seq78 | ||
seq44 | ||
seq9 | ||
seq113 | ||
seq57 | ||
seq8 | ||
seq12 | ||
seq64 | ||
seq63 | ||
seq56 | ||
seq25 | ||
seq31 | ||
seq92 | ||
seq29 | ||
seq95 | ||
seq82 | ||
seq20 | ||
seq15 | ||
seq54 | ||
seq21 | ||
seq80 | ||
seq27 | ||
seq99 | ||
seq102 | ||
seq5 | ||
seq112 | ||
seq2 | ||
seq43 | ||
seq24 | ||
seq14 | ||
seq49 | ||
seq41 | ||
seq94 | ||
seq68 | ||
seq77 | ||
seq52 | ||
seq37 | ||
seq104 | ||
seq32 seq84 | ||
seq40 seq84 | ||
seq3 | ||
seq16 seq84 | ||
seq103 seq84 | ||
seq45 seq84 | ||
seq55 seq84 | ||
seq58 | ||
seq30 | ||
seq19 seq84 | ||
seq97 | ||
seq88 | ||
seq115 seq17 | ||
seq4 seq64 | ||
seq66 | ||
seq73 seq34 | ||
seq1 | ||
seq22 | ||
seq105 seq34 | ||
seq11 seq58 | ||
seq70 | ||
seq18 | ||
seq119 seq109 | ||
seq23 | ||
seq83 seq63 | ||
seq117 seq84 | ||
seq116 seq41 | ||
seq114 | ||
seq111 seq110 | ||
seq107 seq86 | ||
seq101 | ||
seq100 | ||
seq98 | ||
seq90 seq29 | ||
seq81 seq86 | ||
seq26 seq30 | ||
seq69 seq2 | ||
seq61 seq15 | ||
seq51 seq31 | ||
seq46 seq63 | ||
seq42 seq12 | ||
seq39 seq14 | ||
seq36 seq38 | ||
seq35 | ||
seq33 seq17 | ||
seq59 seq24 |
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