SCRUM-3315: add checks for getEvidenceCodes returning null

alliance-genome · Jan 8, 2024 · ab113d5 · ab113d5
1 parent d4c3fad
commit ab113d5
Showing 1 changed file with 6 additions and 2 deletions.
diff --git a/...n/java/org/alliancegenome/indexer/indexers/curation/DiseaseAnnotationCurationIndexer.java b/...n/java/org/alliancegenome/indexer/indexers/curation/DiseaseAnnotationCurationIndexer.java
@@ -136,8 +136,12 @@ private List<GeneDiseaseAnnotationDocument> createGeneDiseaseAnnotationDocuments
 				}
 
 				Map<String, ECOTerm> evidenceCodesMap = new HashMap<String, ECOTerm>();
-				gdad.getEvidenceCodes().forEach( ecoTerm -> evidenceCodesMap.put(ecoTerm.getCurie(), ecoTerm));
-				da.getEvidenceCodes().forEach( ecoTerm -> evidenceCodesMap.put(ecoTerm.getCurie(), ecoTerm));
+				if(gdad.getEvidenceCodes() != null) {
+					gdad.getEvidenceCodes().forEach(ecoTerm -> evidenceCodesMap.put(ecoTerm.getCurie(), ecoTerm));
+				}
+				if(da.getEvidenceCodes() != null) {
+					da.getEvidenceCodes().forEach(ecoTerm -> evidenceCodesMap.put(ecoTerm.getCurie(), ecoTerm));
+				}
 				gdad.setEvidenceCodes(evidenceCodesMap.values().stream().toList());
 
 				if(CollectionUtils.isNotEmpty(da.getDiseaseQualifiers())) {