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@acidgenomics

Acid Genomics

Software for bioinformatics and functional genomics.

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  1. koopa Public

    Shell bootloader for bioinformatics.

    Shell 11 1

  2. dotfiles Public

    Configuration files shared between machines.

    Vim Script

  3. r-cellosaurus Public

    Cellosaurus identifier mapping toolkit.

    R 3 1

  4. r-acidgenomes Public

    Toolkit for downloading and processing genome annotations.

    R 4

  5. r-acidplots Public

    Functions for plotting genomic data.

    R 5 1

  6. r-deseqanalysis Public

    Toolkit for performing differential expression with DESeq2.

    R 3 1

Repositories

Showing 10 of 31 repositories
  • koopa Public

    Shell bootloader for bioinformatics.

    Shell 11 AGPL-3.0 1 5 0 Updated Jan 17, 2025
  • dotfiles Public

    Configuration files shared between machines.

    Vim Script 0 AGPL-3.0 0 0 0 Updated Jan 9, 2025
  • r-cellosaurus Public

    Cellosaurus identifier mapping toolkit.

    R 3 AGPL-3.0 1 0 0 Updated Oct 11, 2024
  • r-bcbiosinglecell Public archive Forked from hbc/bcbioSingleCell

    R package for bcbio single-cell RNA-seq analysis.

    R 0 AGPL-3.0 8 0 0 Updated Sep 9, 2024
  • r-bcbiornaseq Public archive Forked from hbc/bcbioRNASeq

    R package for bcbio RNA-seq analysis.

    R 0 AGPL-3.0 21 0 0 Updated Sep 9, 2024
  • r-bcbiobase Public archive Forked from hbc/bcbioBase

    Base functions for bcbio R packages.

    R 0 AGPL-3.0 3 0 0 Updated Sep 9, 2024
  • r-acidplots Public

    Functions for plotting genomic data.

    R 5 AGPL-3.0 1 0 0 Updated Sep 9, 2024
  • r-syntactic Public

    Make syntactically valid names out of character vectors.

    R 1 AGPL-3.0 0 0 0 Updated Sep 5, 2024
  • r-aciddevtools Public

    Trusty sidekick for R package development.

    R 3 AGPL-3.0 0 0 0 Updated Sep 4, 2024
  • r-acidgenomes Public

    Toolkit for downloading and processing genome annotations.

    R 4 AGPL-3.0 0 1 0 Updated Aug 14, 2024