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Site updated: 2024-08-27 15:18:58
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20 changes: 10 additions & 10 deletions 2024/08/26/DIANN/index.html
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Expand Up @@ -87,7 +87,7 @@ <h1 class="article-title sea-center" style="border-left:0" itemprop="name">
<span class="post-meta-item-icon">
<i class="ri-quill-pen-line"></i>
<span class="post-meta-item-text"> Word count:</span>
<span class="post-count">7k</span>
<span class="post-count">6.9k</span>
</span>
</span>

Expand All @@ -113,23 +113,18 @@ <h1 class="article-title sea-center" style="border-left:0" itemprop="name">

<p><a target="_blank" rel="noopener" href="http://music.163.com/#/song?id=2145149147">http://music.163.com/#/song?id=2145149147</a></p>

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<ol>
<li>Spectral:谱图</li>
</ol>
<blockquote>
<p>the library must <strong>not</strong> contain <strong>non-fragmented precursor ions</strong> as ‘fragments’<br> precursor。each fragment ion must actually be produced by the peptide backbone fragmentation.:在质谱分析中,前体离子通常指的是在质谱仪中经过某种方式(如电离)产生的、尚未进一步碎裂的离子。这些离子在质谱仪的进一步处理中(如碰撞诱导解离CID、高能碰撞解离HCD等)可能会被碎裂成更小的片段离子(Fragment Ions),这些片段离子随后被用于化合物的鉴定和结构分析。</p>
</blockquote>
<p>$S&#x3D;\sqrt{\frac{\sum{(X-\bar{X})^2}} {n-1}}$</p>
<h3 id="为什么进行FASTA文件消化?"><a href="#为什么进行FASTA文件消化?" class="headerlink" title="为什么进行FASTA文件消化?"></a>为什么进行FASTA文件消化?</h3><p><strong>不依赖谱库的搜索(library-free search)方法</strong>,如DIA-NN,直接使用FASTA文件中的蛋白质序列生成假设的肽段,并通过这些<strong>肽段来匹配实验数据</strong>。这种方法<strong>不需要预先构建的谱库,</strong>使得分析过程更加灵活和广泛适用,特别是对于未研究过的样本或新发现的蛋白质。</p>
<h3 id="DIA-NN中的FASTA文件消化步骤"><a href="#DIA-NN中的FASTA文件消化步骤" class="headerlink" title="DIA-NN中的FASTA文件消化步骤"></a>DIA-NN中的FASTA文件消化步骤</h3><ol>
<li><strong>加载FASTA文件</strong>: 研究人员将包含目标蛋白质序列的FASTA文件输入到DIA-NN中。</li>
Expand Down Expand Up @@ -877,6 +872,11 @@ <h3 id="Summary"><a href="#Summary" class="headerlink" title="Summary"></a>Summa
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<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions about/index.html
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Expand Up @@ -522,6 +522,11 @@ <h1 class="article-title sea-center" style="border-left:0" itemprop="name">
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script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions archives/2024/08/index.html
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Expand Up @@ -439,6 +439,11 @@ <h2 itemprop="name">
<script src="https://cdn.jsdelivr.net/npm/meting@2/dist/Meting.min.js"></script>


<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions archives/2024/index.html
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Expand Up @@ -439,6 +439,11 @@ <h2 itemprop="name">
<script src="https://cdn.jsdelivr.net/npm/meting@2/dist/Meting.min.js"></script>


<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions archives/index.html
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Expand Up @@ -439,6 +439,11 @@ <h2 itemprop="name">
<script src="https://cdn.jsdelivr.net/npm/meting@2/dist/Meting.min.js"></script>


<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions categories/index.html
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Expand Up @@ -399,6 +399,11 @@ <h1 class="page-type-title">Categories</h1>
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script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions categories/蛋白/index.html
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Expand Up @@ -445,6 +445,11 @@ <h2 itemprop="name">
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script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions friends/index.html
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Expand Up @@ -419,6 +419,11 @@ <h1 class="page-type-title">Friends</h1>
<script src="https://cdn.jsdelivr.net/npm/meting@2/dist/Meting.min.js"></script>


<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions index.html
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Expand Up @@ -546,6 +546,11 @@ <h2 itemprop="name">
<script src="https://cdn.jsdelivr.net/npm/meting@2/dist/Meting.min.js"></script>


<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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13 changes: 4 additions & 9 deletions search.xml
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Expand Up @@ -5,23 +5,18 @@
<url>/2024/08/26/DIANN/</url>
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></div> -->
<ol>
<li>Spectral:谱图</li>
</ol>
<blockquote>
<p>the library must <strong>not</strong> contain <strong>non-fragmented precursor ions</strong> as ‘fragments’<br> precursor。each fragment ion must actually be produced by the peptide backbone fragmentation.:在质谱分析中,前体离子通常指的是在质谱仪中经过某种方式(如电离)产生的、尚未进一步碎裂的离子。这些离子在质谱仪的进一步处理中(如碰撞诱导解离CID、高能碰撞解离HCD等)可能会被碎裂成更小的片段离子(Fragment Ions),这些片段离子随后被用于化合物的鉴定和结构分析。</p>
</blockquote>
<p>$S&#x3D;\sqrt{\frac{\sum{(X-\bar{X})^2}} {n-1}}$</p>
<h3 id="为什么进行FASTA文件消化?"><a href="#为什么进行FASTA文件消化?" class="headerlink" title="为什么进行FASTA文件消化?"></a>为什么进行FASTA文件消化?</h3><p><strong>不依赖谱库的搜索(library-free search)方法</strong>,如DIA-NN,直接使用FASTA文件中的蛋白质序列生成假设的肽段,并通过这些<strong>肽段来匹配实验数据</strong>。这种方法<strong>不需要预先构建的谱库,</strong>使得分析过程更加灵活和广泛适用,特别是对于未研究过的样本或新发现的蛋白质。</p>
<h3 id="DIA-NN中的FASTA文件消化步骤"><a href="#DIA-NN中的FASTA文件消化步骤" class="headerlink" title="DIA-NN中的FASTA文件消化步骤"></a>DIA-NN中的FASTA文件消化步骤</h3><ol>
<li><strong>加载FASTA文件</strong>: 研究人员将包含目标蛋白质序列的FASTA文件输入到DIA-NN中。</li>
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5 changes: 5 additions & 0 deletions tags/DIA-NN/index.html
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Expand Up @@ -443,6 +443,11 @@ <h2 itemprop="name">
<script src="https://cdn.jsdelivr.net/npm/meting@2/dist/Meting.min.js"></script>


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script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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5 changes: 5 additions & 0 deletions tags/index.html
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Expand Up @@ -399,6 +399,11 @@ <h1 class="page-type-title">Tags</h1>
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<link(rel='stylesheet' href=url_for(theme.asset.aplayer_css) media="print" onload="this.media='all'")
script(src=url_for(theme.asset.aplayer_js))
script(src=url_for(theme.asset.meting_js))
+script.
+ var meting_api='https://zhao-peng.top/api/?server=:server&type=:type&id=:id&auth=:auth&r=:r';</ink>



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