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error installation Create Linear Issue #132: Issue #399 opened by jarojasva
February 27, 2025 04:32 16s
February 27, 2025 04:32 16s
--trans_table parameter not working as expected Create Linear Issue #131: Issue #398 opened by m-taubert
February 26, 2025 14:33 14s
February 26, 2025 14:33 14s
DRAM2 does not handle SLURM submissions using non-default accounts (includes work-around) Create Linear Issue #130: Issue #397 opened by LSHillary
February 6, 2025 07:32 13s
February 6, 2025 07:32 13s
problem with the combine_annotations step Create Linear Issue #129: Issue #396 opened by ssvassiliev
February 1, 2025 16:30 15s
February 1, 2025 16:30 15s
Files have to be renamed for merge_annotations function Create Linear Issue #128: Issue #395 opened by zehanna
January 31, 2025 09:11 17s
January 31, 2025 09:11 17s
rename.sh not found Create Linear Issue #127: Issue #394 opened by jlw-ecoevo
January 30, 2025 16:16 11s
January 30, 2025 16:16 11s
DRAM2 fails during large batch due to ARG_MAX Create Linear Issue #126: Issue #393 opened by zackhenny
January 14, 2025 16:56 13s
January 14, 2025 16:56 13s
Database download interrupted Create Linear Issue #125: Issue #392 opened by baidefeng
December 17, 2024 06:23 11s
December 17, 2024 06:23 11s
downloading the databases Create Linear Issue #124: Issue #391 opened by vdejager
November 29, 2024 13:26 16s
November 29, 2024 13:26 16s
Long processing time during DRAM annotate, step "Getting forward best hits from kegg" Create Linear Issue #123: Issue #390 opened by ganiatgithub
November 21, 2024 20:58 15s
November 21, 2024 20:58 15s
Add nf-core style testing suite for the Nextflow side of the code Create Linear Issue #122: Issue #389 opened by madeline-scyphers
November 8, 2024 15:48 12s
November 8, 2024 15:48 12s
Add logging in python side of DRAM Create Linear Issue #121: Issue #388 opened by madeline-scyphers
November 8, 2024 15:47 15s
November 8, 2024 15:47 15s
Question about DRAM-v output Create Linear Issue #120: Issue #386 opened by deminatanja
November 5, 2024 12:23 15s
November 5, 2024 12:23 15s
pages build and deployment pages-build-deployment #30: by madeline-scyphers
November 4, 2024 18:31 41s master
master
November 4, 2024 18:31 41s
Add much better logging throughout the pipeline Create Linear Issue #119: Issue #382 opened by madeline-scyphers
October 21, 2024 15:51 14s
October 21, 2024 15:51 14s
Add better input validation for input combinations that don't make sense Create Linear Issue #118: Issue #381 opened by madeline-scyphers
October 21, 2024 15:49 11s
October 21, 2024 15:49 11s
Create a DOI for the DRAM software with zenodo Create Linear Issue #117: Issue #380 opened by madeline-scyphers
October 17, 2024 22:33 12s
October 17, 2024 22:33 12s
input_fasta argument has to end with / otherwise fasta_fmt doesn't get appended properly Create Linear Issue #116: Issue #379 opened by madeline-scyphers
October 17, 2024 20:33 15s
October 17, 2024 20:33 15s
When writing outputs or logs, if already exists, append with something Create Linear Issue #115: Issue #378 opened by madeline-scyphers
October 17, 2024 19:04 16s
October 17, 2024 19:04 16s
All CLI help text defaults should pull from the config default, the config defualt instead of being hard coded Create Linear Issue #114: Issue #377 opened by madeline-scyphers
October 17, 2024 19:01 14s
October 17, 2024 19:01 14s
Add close inactive issue workflow/action Create Linear Issue #113: Issue #376 opened by madeline-scyphers
October 17, 2024 17:37 12s
October 17, 2024 17:37 12s
Setup milestones for tracking issues and development progress Create Linear Issue #112: Issue #375 opened by madeline-scyphers
October 17, 2024 16:44 12s
October 17, 2024 16:44 12s
DRAM visualization (product) tracking issue Create Linear Issue #111: Issue #374 opened by madeline-scyphers
October 17, 2024 16:07 14s
October 17, 2024 16:07 14s
DRAM v2 README has too much hard coded things in it (like the --help output) Create Linear Issue #110: Issue #373 opened by madeline-scyphers
October 17, 2024 15:52 14s
October 17, 2024 15:52 14s
DRAM trees and adjectives implementation Create Linear Issue #109: Issue #372 opened by madeline-scyphers
October 17, 2024 15:48 13s
October 17, 2024 15:48 13s