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gxm_MMPBSA first release

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@Valdes-Tresanco-MS Valdes-Tresanco-MS released this 31 Oct 22:26
· 1885 commits to master since this release

gmx_MMPBSA is a new tool aid to perform end-state free energy calculations based on AMBER's MMPBSA.py with GROMACS files.
This version includes:

  • Compatibility with different Gromacs versions
  • Support for all types of calculations available in MMPBSA.py
  • Graphical user interface for results analysis (gmx_MMPBSA_gui)
  • API modified to get more information
  • Some new facilities and types of calculations

Consult the documentation for more information

New features to implement:
gmx_MMPBSA_gui

  • Add tooltips for more information
  • Add detailed documentation
  • Add customization options for graphics
    • Labels, titles, rotation, color, etc
    • Selection of intervals for calculations
    • Option to visualize several types of calculations in the same graph
  • Add new menu with documentation, about, version, and check updates

API

  • documentation
  • incorporate Interaction Entropy