actions test

USDA-ARS-GBRU · Sep 18, 2024 · 5143001 · 5143001
1 parent 6342c1d
commit 5143001
Showing 1 changed file with 5 additions and 2 deletions.
diff --git a/.github/workflows/python-package-conda.yml b/.github/workflows/python-package-conda.yml
@@ -33,14 +33,17 @@ jobs:
         conda env create -n testenv --file=https://data.qiime2.org/distro/amplicon/qiime2-amplicon-2024.5-py39-linux-conda.yml
     - name: Install Dependencies
       run: |
+        conda activate testenv 
         conda install biopython=1.84
         pip install pyzstd
         pip install pytest
         pip install .
     - name: Test with pytest
       run: |
-        cd /home/runner/work/itsxpress/tests
-        pytest
+        pwd
+        ls
+        # cd /home/runner/work/itsxpress/tests
+        # pytest
     - name: Test qiime install
       run: |
         qiime dev refresch-cache