update to clone repo in dockerfile

USDA-ARS-GBRU · Nov 7, 2023 · 2c985b8 · 2c985b8
1 parent dd099a7
commit 2c985b8
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/docker-images/Dockerfile b/docker-images/Dockerfile
@@ -15,7 +15,7 @@ RUN mamba install -c bioconda vsearch=2.22.1 hmmer=3.1b2
 # Copy the itsxpress package files and install dependencies
 COPY .. /app
 WORKDIR /app
-RUN pip install --no-cache-dir .
+RUN git clone https://github.com/USDA-ARS-GBRU/itsxpress.git && cd itsxpress && pip install .
 
 # Set the default command to run itsxpress
 CMD ["itsxpress"]