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Update freyja to 1.5.0-04_14_2024-00-49-2024-04-16
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erinyoung authored Apr 16, 2024
1 parent f2e9235 commit 80ea4c4
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions modules/freyja.nf
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ process freyja_variants {
label "process_medium"
//errorStrategy { task.attempt < 2 ? 'retry' : 'ignore'}
publishDir path: params.outdir, mode: 'copy', saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
container 'staphb/freyja:1.5.0-04_09_2024-00-44-2024-04-09'
container 'staphb/freyja:1.5.0-04_14_2024-00-49-2024-04-16'

//#UPHLICA maxForks 10
//#UPHLICA pod annotation: 'scheduler.illumina.com/presetSize', value: 'standard-xlarge'
Expand Down Expand Up @@ -53,7 +53,7 @@ process freyja_demix {
label "process_medium"
//errorStrategy { task.attempt < 2 ? 'retry' : 'ignore'}
publishDir path: params.outdir, mode: 'copy', saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
container 'staphb/freyja:1.5.0-04_09_2024-00-44-2024-04-09'
container 'staphb/freyja:1.5.0-04_14_2024-00-49-2024-04-16'


//#UPHLICA maxForks 10
Expand Down Expand Up @@ -105,7 +105,7 @@ process freyja_aggregate {
tag "Aggregating results from freyja"
label "process_single"
publishDir path: params.outdir, mode: 'copy', saveAs: { filename -> filename.equals('versions.yml') ? null : filename }
container 'staphb/freyja:1.5.0-04_09_2024-00-44-2024-04-09'
container 'staphb/freyja:1.5.0-04_14_2024-00-49-2024-04-16'

//#UPHLICA maxForks 10
//#UPHLICA errorStrategy { task.attempt < 2 ? 'retry' : 'ignore'}
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