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Add statistics episode #31

Merged
merged 14 commits into from
Feb 11, 2024
Merged

Add statistics episode #31

merged 14 commits into from
Feb 11, 2024

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milanmlft
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@milanmlft milanmlft commented Feb 9, 2024

  • Add @jimbotyson's statistics episode
  • Formatting + fix typos
  • Add Carpentries objectives and questions block
  • Fix callout blocks to follow Carpentries format
  • Remove ::: columns blocks -> not supported by sandpaper
  • Update renv

To do

  • Add correct data
  • Add missing images
  • Add instructions on how to download data from github repo (in R)

Fixes #1

@milanmlft milanmlft linked an issue Feb 9, 2024 that may be closed by this pull request
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github-actions bot commented Feb 9, 2024

Thank you!

Thank you for your pull request 😃

🤖 This automated message can help you check the rendered files in your submission for clarity. If you have any questions, please feel free to open an issue in {sandpaper}.

If you have files that automatically render output (e.g. R Markdown), then you should check for the following:

  • 🎯 correct output
  • 🖼️ correct figures
  • ❓ new warnings
  • ‼️ new errors

Rendered Changes

🔍 Inspect the changes: https://github.com/UCL/ClinicianCoders/compare/md-outputs..md-outputs-PR-31

The following changes were observed in the rendered markdown documents:

 01-rstudio-intro.md                                |    2 +-
 02-project-intro.md                                |    2 +-
 config.yaml (gone)                                 |   96 -
 data/intermediate_CCHIC.csv (new)                  | 5001 ++++++++++++++++++++
 fig/ContinuousDistribution.png (new)               |  Bin 0 -> 39548 bytes
 fig/HistogramAge.png (new)                         |  Bin 0 -> 15084 bytes
 fig/HistogramHeight.png (new)                      |  Bin 0 -> 14249 bytes
 fig/IntervalData.png (new)                         |  Bin 0 -> 474366 bytes
 fig/NormalDistribution.png (new)                   |  Bin 0 -> 29226 bytes
 fig/OrdinalData.png (new)                          |  Bin 0 -> 203256 bytes
 fig/Test.png (new)                                 |  Bin 0 -> 185664 bytes
 fig/pValue.png (new)                               |  Bin 0 -> 47712 bytes
 fig/pValue2.png (new)                              |  Bin 0 -> 100615 bytes
 ...tatistics-rendered-unnamed-chunk-18-1.png (new) |  Bin 0 -> 4535 bytes
 ...tatistics-rendered-unnamed-chunk-21-1.png (new) |  Bin 0 -> 36000 bytes
 md5sum.txt                                         |   53 +-
 renv.lock (gone)                                   | 1053 -----
 results/lifeExp.png                                |  Bin 186154 -> 180781 bytes
 statistics.md (new)                                |  772 +++
 19 files changed, 5802 insertions(+), 1177 deletions(-)
What does this mean?

If you have source files that require output and figures to be generated (e.g. R Markdown), then it is important to make sure the generated figures and output are reproducible.

This output provides a way for you to inspect the output in a diff-friendly manner so that it's easy to see the changes that occur due to new software versions or randomisation.

⏱️ Updated at 2024-02-11 18:13:46 +0000

@milanmlft milanmlft requested a review from jimbotyson February 9, 2024 12:14
github-actions bot pushed a commit that referenced this pull request Feb 9, 2024
github-actions bot pushed a commit that referenced this pull request Feb 11, 2024
@milanmlft milanmlft removed the request for review from jimbotyson February 11, 2024 18:05
@milanmlft milanmlft marked this pull request as ready for review February 11, 2024 18:11
github-actions bot pushed a commit that referenced this pull request Feb 11, 2024
@milanmlft milanmlft merged commit e7d8129 into main Feb 11, 2024
3 checks passed
@milanmlft milanmlft deleted the 1-add-episode-on-statistics branch February 11, 2024 18:15
github-actions bot pushed a commit that referenced this pull request Feb 11, 2024
Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Feb 11, 2024
Auto-generated via {sandpaper}
Source  : b5e30bc
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-02-11 18:20:56 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Feb 13, 2024
Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Feb 13, 2024
Auto-generated via {sandpaper}
Source  : 89d9b56
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-02-13 00:23:57 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Feb 20, 2024
Auto-generated via {sandpaper}
Source  : 89d9b56
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-02-13 00:23:57 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Feb 27, 2024
Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Feb 27, 2024
Auto-generated via {sandpaper}
Source  : 3030c5b
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-02-27 00:31:57 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Mar 5, 2024
Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
github-actions bot pushed a commit that referenced this pull request Mar 5, 2024
Auto-generated via {sandpaper}
Source  : 3badcec
Branch  : md-outputs
Author  : GitHub Actions <[email protected]>
Time    : 2024-03-05 00:22:35 +0000
Message : markdown source builds

Auto-generated via {sandpaper}
Source  : e7d8129
Branch  : main
Author  : Milan Malfait <[email protected]>
Time    : 2024-02-11 18:15:29 +0000
Message : Merge pull request #31 from UCL/1-add-episode-on-statistics

Add statistics episode
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Add episode on Statistics
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