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Release 0.7.0 (#130)
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* updates to README reflecting new installation

* roll Travis forward to 2.0.5

* update NEWS.md

* set version to 0.7.0

* update pkgdown documentation in docs/

* also re-build html vignette on Travis
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eddelbuettel authored Jun 15, 2020
1 parent 529bcb7 commit 316c407
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14 changes: 6 additions & 8 deletions .travis.yml
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Expand Up @@ -13,20 +13,18 @@ jobs:
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:dev"
- name: 1.7.7
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:1.7.7"
#- name: 2.0.0
# env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:2.0.0"
- name: 2.0.1
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:2.0.1"
- name: 2.0.2
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:2.0.2"
- name: 2.0.3
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:2.0.3"
- name: 2.0.4
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:2.0.4"
- name: 2.0.5
env: DOCKER_CNTR="eddelbuettel/rocker-tiledb:2.0.5"

env:
global:
- DOCKER_OPTS="--rm -ti -v $(pwd):/mnt -w /mnt"
R_BLD_OPTS="--no-build-vignettes --no-manual"
R_CHK_OPTS="--no-vignettes --no-manual"
R_BLD_OPTS="--no-manual"
R_CHK_OPTS="--no-manual"

before_install:
- docker pull ${DOCKER_CNTR}
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2 changes: 1 addition & 1 deletion DESCRIPTION
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@@ -1,6 +1,6 @@
Package: tiledb
Type: Package
Version: 0.6.0
Version: 0.7.0
Title: Sparse and Dense Multidimensional Array Storage Engine for Data Science
Author: TileDB, Inc.
Maintainer: Dirk Eddelbuettel <[email protected]>
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56 changes: 28 additions & 28 deletions R/DenseArray.R
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Expand Up @@ -86,34 +86,34 @@ setMethod("show",
, sep="")
})

#' #' Reopens a TileDB array an opened tiledb array
#' #'
#' #' Reopening an array is useful when the array got updated after it got opened
#' #' and the tiledb array object got created. To sync-up with the updates,
#' #' the user must either close the array and open again,
#' #' or just use tiledb_reopen(array) which can be faster because
#' #' only metdata regarding updates has to be loaded.
#' #'
#' #' @param object tileb array object
#' #' @return the reopened array object
#' #' @export
#' setGeneric("reopen", function(object, ...) standardGeneric("reopen"))
#'
#' #' @export
#' setMethod("reopen", "tiledb_dense", function(object) {
#' libtiledb_array_reopen(object@ptr)
#' return(object)
#' })
#'
#' #' Closes a tiledb array object
#' #'
#' #' @param conn tiledb array object
#' #' @return returns the closed array object
#' close.tiledb_dense <- function(conn, ...) {
#' stopifnot(is(conn, "tiledb_dense"))
#' libtiledb_array_close(conn@ptr)
#' return(conn);
#' }
# # ' Reopens a TileDB array an opened tiledb array
# # '
# # ' Reopening an array is useful when the array got updated after it got opened
# # ' and the tiledb array object got created. To sync-up with the updates,
# # ' the user must either close the array and open again,
# # ' or just use tiledb_reopen(array) which can be faster because
# # ' only metdata regarding updates has to be loaded.
# # '
# # ' @param object tileb array object
# # ' @return the reopened array object
# # ' @export
# setGeneric("reopen", function(object, ...) standardGeneric("reopen"))
#
# # ' @export
# setMethod("reopen", "tiledb_dense", function(object) {
# libtiledb_array_reopen(object@ptr)
# return(object)
# })
#
# # ' Closes a tiledb array object
# # '
# # ' @param conn tiledb array object
# # ' @return returns the closed array object
# close.tiledb_dense <- function(conn, ...) {
# stopifnot(is(conn, "tiledb_dense"))
# libtiledb_array_close(conn@ptr)
# return(conn);
# }

#' Returns true is if the array or array_schema is sparse
#'
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15 changes: 8 additions & 7 deletions README.md
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Expand Up @@ -17,8 +17,9 @@ API](https://docs.tiledb.com/main/).

## Installation

TileDB needs to be installed first (from a package or from source)
for the TileDB R package to build and link correctly.
TileDB needs to be present, and can to be installed first (from a package or from source)
for the TileDB R package to build and link correctly. For macOS and Linux, a precompiled
shared library is used during the installation of this R package.

As the TileDB R package has not been published on [CRAN](https://cran.r-project.org/), it must be
installed from source.
Expand All @@ -33,7 +34,7 @@ The most recent released version can be installed from
> library(tiledb)
> tiledb_version()
major minor patch
2 0 0
2 0 5
> help(package=tiledb)

If the TileDB library is installed in a custom location, you need to pass the explicit path:
Expand All @@ -46,10 +47,10 @@ of TileDB, but should also build against the newest development version.

## Quick Links

- [Installation](https://docs.tiledb.com/developer/installation)
- [Quickstart](https://docs.tiledb.com/developer/quickstart)
- [Reference Docs](https://tiledb-inc.github.io/TileDB-R/)
- [Support](https://forum.tiledb.com/)
- [TileDB Installation](https://docs.tiledb.com/developer/installation)
- [TileDB Quickstart](https://docs.tiledb.com/developer/quickstart)
- [TileDB R Reference Docs](https://tiledb-inc.github.io/TileDB-R/)
- [TileDB Support](https://forum.tiledb.com/)

## Copyright

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1 change: 1 addition & 0 deletions _pkgdown.yml
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Expand Up @@ -30,6 +30,7 @@ reference:
- title: ArraySchema
contents:
- starts_with("tiledb_array_schema")
- starts_with("allows_dups")
- matches("r_to_tiledb_type")
- title: Attribute
contents:
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16 changes: 14 additions & 2 deletions docs/404.html

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18 changes: 15 additions & 3 deletions docs/LICENSE-text.html

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156 changes: 156 additions & 0 deletions docs/articles/index.html

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