Repositorio para guardar codigo perteneciente al proyecto "Detección de cianobacterias mediante sensado remoto e inteligencia artificial"

Requirements

• Ubuntu 18.04
• Anaconda

Setup

Environment

conda env create -f linux_conda_env.yml

snappy

It is necessary to install the SNAP python API (snappy). Start by changing to the home directory of your current user. In my case: cd /home/ubuntu

wget https://download.esa.int/step/snap/8.0/installers/esa-snap_all_unix_8_0.sh ; sh esa-snap_all_unix_8_0.sh

Go through the installation and choose to configure SNAP for use with python but then choose not to run SNAP Desktop and configure Python.

cd /home/ubuntu/snap/bin ; ./snappy-conf /home/ubuntu/anaconda3/envs/cyano_venv/bin/python

cd /home/ubuntu/.snap/snap-python/snappy/

/home/ubuntu/anaconda3/envs/cyano_venv/bin/python setup.py install

Use conda env in jupyter notebooks

pip install ipykernel ; python -m ipykernel install --user --name=cyano_venv

OpenCV dependencies

apt-get install ffmpeg libsm6 libxext6 -y