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v1.0.1
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@kaizhang kaizhang released this 15 Oct 06:14
v1.0.1
eb0d439

This release introduces a lot of new functions, performance improvements and bug fixes.

  • Use promoter accessibility to estimate the gene expression when RNA-seq is not available. This greately improves the results.

  • New interface for Parallelism and distributed computing which supports running jobs on PBS or slurm. The number of jobs and resource usage of each step can now be configured.

  • Add more QCs and visualization, including fragment size distribution, TSS enrichment, signal correlation and so on.

  • Preliminary support for single cell RNA and ATAC analysis.

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