R scripts for fitting photosynthetic light response curves and inverting leaf reflectance observations with the PROSPECT-5 leaf radiative transfer model (RTM). These scripts were used in the development of:
Rogers, A., Serbin, S.P., Ely, K.S. and Wullschleger, S.D. (2019), Terrestrial biosphere models may overestimate Arctic CO2 assimilation if they do not account for decreased quantum yield and convexity at low temperature. New Phytol, 223: 167-179. https://doi.org/10.1111/nph.15750
Compiled LiCor light response curve measurements and scripts for fitting light response curve data and for calculating leaf absorptance from measurements of leaf reflectance
Rogers A, Ely KS, Serbin SP 2018. Leaf photosynthetic parameters: quantum yield, convexity, respiration, gross CO2 assimilation rate and raw gas exchange data, Barrow, Alaska, 2016. Next Generation Ecosystem Experiments Arctic Data Collection. Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, Oak Ridge, TN, USA. doi: 10.5440/1482338.
Serbin SP, Lieberman-Cribbin W, Ely KS, Rogers A. 2018. NGEE Arctic Leaf Spectral Reflectance and Transmittance, Barrow, Alaska, 2014-2016. Next Generation Ecosystem Experiments Arctic Data Collection. Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, Oak Ridge, TN, USA. doi: 10.5440/1482337.
Zenodo code archive DOI:
