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Deploy pasty version 2.1.0 #442

Deploy pasty version 2.1.0

Deploy pasty version 2.1.0 #442

Re-run triggered August 28, 2024 20:17
Status Failure
Total duration 1m 32s
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manual-deploy.yml

on: workflow_dispatch
build-to-test  /  build_to_test
1m 22s
build-to-test / build_to_test
build-to-deploy  /  build
build-to-deploy / build
run-singularity  /  build_singularity
run-singularity / build_singularity
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1 error
build-to-test / build_to_test
buildx failed with: ERROR: failed to solve: process "/usr/local/bin/_dockerfile_shell.sh wget -q https://github.com/rpetit3/pasty/archive/refs/tags/v${PASTY_VER}.tar.gz && tar -xvf v${PASTY_VER}.tar.gz && cd pasty-${PASTY_VER}/test/ && for i in $(ls data | grep \"fna.gz\"); do pasty --input ./data/$i --prefix $(basename $i .fna.gz) --outdir results/ --force; done && head -n 1 results/O1-GCF_001420225.tsv > staphb-test.tsv && ls results/ | grep -v \"details\" | grep -v \"blastn\" | xargs -I {} grep -v \"schema_version\" results/{} | sort -k1 >> staphb-test.tsv && cat staphb-test.tsv" did not complete successfully: exit code: 1