Run snakemake using Github action

Snitkin-Lab-Umich · Jan 21, 2025 · fffbbc2 · fffbbc2
1 parent abb8756
commit fffbbc2
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/test_pipeline.yml b/.github/workflows/test_pipeline.yml
@@ -141,7 +141,7 @@ jobs:
         #   source $CONDA/bin/activate
         #   conda activate qcd_env_test
         #   snakemake -s QCD.smk -p --use-conda --use-singularity --conda-frontend conda --configfile .test/config/config.yaml --latency-wait 1000 --cores 4 
-        # uses: snakemake/[email protected]
+        uses: snakemake/[email protected]
         with:
           directory: '.'
           snakefile: 'QCD.smk'