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Fix #33
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ShixiangWang committed Oct 5, 2019
1 parent be225db commit 4950ec9
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10 changes: 10 additions & 0 deletions NAMESPACE
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Expand Up @@ -46,6 +46,7 @@ importFrom(furrr,future_pmap)
importFrom(future,plan)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,hist)
importFrom(magrittr,"%>%")
importFrom(rlang,":=")
importFrom(rlang,.data)
Expand All @@ -56,3 +57,12 @@ importFrom(rlang,enquos)
importFrom(rlang,expr)
importFrom(rlang,sym)
importFrom(rlang,syms)
importFrom(stats,as.formula)
importFrom(stats,fisher.test)
importFrom(stats,pairwise.table)
importFrom(stats,quantile)
importFrom(stats,setNames)
importFrom(utils,data)
importFrom(utils,download.file)
importFrom(utils,head)
importFrom(utils,packageDescription)
2 changes: 1 addition & 1 deletion R/bayesianNMF.R
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Expand Up @@ -35,7 +35,7 @@
# see J Kim, Mouw K, P Polak et al, Somatic ERCC2 mutations are associated with a distinct genomic signature in urothelial tumors
# Nat. Genet. (2016) DOI: 10.1038/ng.3557
# For details on the original algorithms
# see Tan, V.Y. & Févotte, C. Automatic relevance determination in nonnegative matrix factorization with the beta-divergence.
# see Tan, V.Y. & Fe<U+0301>votte, C. Automatic relevance determination in nonnegative matrix factorization with the beta-divergence.
# IEEE Trans. Pattern Anal. Mach. Intell. 35, 1592–1605 (2013).
#
# They are modified by me for better used in sigminer
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