NAMESPACE

# Generated by roxygen2: do not edit by hand

export(TF_networks)
export(batch_removal)
export(diff_limma_all)
export(diff_limma_pairwise)
export(diff_limma_pw_unfiltered)
export(geneAnnotations)
export(heatmaps)
export(module_eigengene_plot)
export(normalise_eset)
export(pathview_func)
export(pca_plot)
export(pca_plot_enrich)
export(quality_control_plots)
export(read_Illumina)
export(read_bam_to_countmatrix)
export(var_vs_mean)
export(wgcna_heatmaps)
export(wgcna_modulememberships)
export(wgcna_plotDendroAndColors)
export(wgcna_sample_dendrogram)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,rgb)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,box)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(stats,as.dendrogram)
importFrom(stats,as.dist)
importFrom(stats,cor.test)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,lm)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(utils,data)
importFrom(utils,install.packages)
importFrom(utils,installed.packages)
importFrom(utils,write.table)