build based on 811b9c6

dev/.documenter-siteinfo.json

@@ -1 +1 @@
-{"documenter":{"julia_version":"1.10.1","generation_timestamp":"2024-02-15T00:48:35","documenter_version":"1.2.1"}}
+{"documenter":{"julia_version":"1.10.1","generation_timestamp":"2024-02-22T06:16:19","documenter_version":"1.2.1"}}

dev/assets/Project.toml

@@ -30,7 +30,7 @@ NLopt = "0.6, 1"
 Optim = "1"
 Optimization = "3"
 OptimizationBBO = "0.1, 0.2"
-OptimizationMOI = "0.1, 0.2, 0.3"
+OptimizationMOI = "0.1, 0.2, 0.3, 0.4"
 OptimizationNLopt = "0.1, 0.2"
 OptimizationOptimJL = "0.1, 0.2"
 Plots = "1"

dev/index.html

@@ -12,11 +12,11 @@
   [429524aa] Optim v1.9.2
   [7f7a1694] Optimization v3.22.0
   [3e6eede4] OptimizationBBO v0.2.1
-  [fd9f6733] OptimizationMOI v0.3.4
+  [fd9f6733] OptimizationMOI v0.4.0
   [4e6fcdb7] OptimizationNLopt v0.2.0
   [36348300] OptimizationOptimJL v0.2.2
   [91a5bcdd] Plots v1.40.1
-  [731186ca] RecursiveArrayTools v3.8.1
+  [731186ca] RecursiveArrayTools v3.10.0
   [1ed8b502] SciMLSensitivity v7.55.0
   [e88e6eb3] Zygote v0.6.69</code></pre></details><details><summary>and using this machine and Julia version.</summary><pre class="documenter-example-output"><code class="nohighlight hljs ansi">Julia Version 1.10.1
 Commit 7790d6f0641 (2024-02-13 20:41 UTC)
@@ -32,10 +32,10 @@
   [47edcb42] ADTypes v0.2.6
   [a4c015fc] ANSIColoredPrinters v0.0.1
   [621f4979] AbstractFFTs v1.5.0
-  [1520ce14] AbstractTrees v0.4.4
-⌅ [79e6a3ab] Adapt v3.7.2
+  [1520ce14] AbstractTrees v0.4.5
+  [79e6a3ab] Adapt v4.0.1
 ⌅ [ec485272] ArnoldiMethod v0.2.0
-  [4fba245c] ArrayInterface v7.7.0
+  [4fba245c] ArrayInterface v7.7.1
   [4c555306] ArrayLayouts v1.6.0
   [a9b6321e] Atomix v0.1.0
   [aae01518] BandedMatrices v1.5.0
@@ -44,15 +44,15 @@
   [d1d4a3ce] BitFlags v0.1.8
   [62783981] BitTwiddlingConvenienceFunctions v0.1.5
   [a134a8b2] BlackBoxOptim v0.6.3
-⌃ [764a87c0] BoundaryValueDiffEq v5.6.0
+  [764a87c0] BoundaryValueDiffEq v5.6.2
   [fa961155] CEnum v0.5.0
   [2a0fbf3d] CPUSummary v0.2.4
   [a9c8d775] CPUTime v1.0.0
   [00ebfdb7] CSTParser v3.4.1
   [49dc2e85] Calculus v0.5.1
   [7057c7e9] Cassette v0.3.13
   [082447d4] ChainRules v1.63.0
-  [d360d2e6] ChainRulesCore v1.21.1
+  [d360d2e6] ChainRulesCore v1.22.0
   [fb6a15b2] CloseOpenIntervals v0.1.12
   [523fee87] CodecBzip2 v0.8.2
   [944b1d66] CodecZlib v0.7.4
@@ -64,7 +64,7 @@
   [a80b9123] CommonMark v0.8.12
   [38540f10] CommonSolve v0.2.4
   [bbf7d656] CommonSubexpressions v0.3.0
-  [34da2185] Compat v4.12.0
+  [34da2185] Compat v4.13.0
   [b152e2b5] CompositeTypes v0.1.3
   [2569d6c7] ConcreteStructs v0.2.3
   [f0e56b4a] ConcurrentUtilities v2.3.1
@@ -74,13 +74,13 @@
   [adafc99b] CpuId v0.3.1
   [a8cc5b0e] Crayons v4.1.1
   [9a962f9c] DataAPI v1.16.0
-  [864edb3b] DataStructures v0.18.16
+  [864edb3b] DataStructures v0.18.17
   [e2d170a0] DataValueInterfaces v1.0.0
   [bcd4f6db] DelayDiffEq v5.46.0
   [8bb1440f] DelimitedFiles v1.9.1
   [39dd38d3] Dierckx v0.5.3
   [2b5f629d] DiffEqBase v6.147.0
-  [459566f4] DiffEqCallbacks v2.37.0
+⌅ [459566f4] DiffEqCallbacks v2.37.0
   [77a26b50] DiffEqNoiseProcess v5.20.1
   [1130ab10] DiffEqParamEstim v2.2.0 `~/work/DiffEqParamEstim.jl/DiffEqParamEstim.jl`
   [163ba53b] DiffResults v1.1.0
@@ -92,10 +92,10 @@
   [e30172f5] Documenter v1.2.1
 ⌅ [5b8099bc] DomainSets v0.6.7
   [fa6b7ba4] DualNumbers v0.6.8
-  [7c1d4256] DynamicPolynomials v0.5.4
+  [7c1d4256] DynamicPolynomials v0.5.5
   [da5c29d0] EllipsisNotation v1.8.0
   [4e289a0a] EnumX v1.0.4
-  [7da242da] Enzyme v0.11.15
+  [7da242da] Enzyme v0.11.17
   [f151be2c] EnzymeCore v0.6.5
   [460bff9d] ExceptionUnwrapping v0.1.10
   [d4d017d3] ExponentialUtilities v1.26.1
@@ -114,34 +114,34 @@
   [069b7b12] FunctionWrappers v1.1.3
   [77dc65aa] FunctionWrappersWrappers v0.1.3
   [d9f16b24] Functors v0.4.7
-⌃ [0c68f7d7] GPUArrays v9.1.0
-⌅ [46192b85] GPUArraysCore v0.1.5
-  [61eb1bfa] GPUCompiler v0.25.0
+  [0c68f7d7] GPUArrays v10.0.2
+  [46192b85] GPUArraysCore v0.1.6
+⌅ [61eb1bfa] GPUCompiler v0.25.0
   [28b8d3ca] GR v0.73.2
   [c145ed77] GenericSchur v0.5.3
   [d7ba0133] Git v1.3.0
   [c27321d9] Glob v1.3.1
   [86223c79] Graphs v1.9.0
   [42e2da0e] Grisu v1.0.2
-  [cd3eb016] HTTP v1.10.1
+  [cd3eb016] HTTP v1.10.2
   [3e5b6fbb] HostCPUFeatures v0.1.16
   [34004b35] HypergeometricFunctions v0.3.23
   [b5f81e59] IOCapture v0.2.4
   [7869d1d1] IRTools v0.4.12
   [615f187c] IfElse v0.1.1
   [d25df0c9] Inflate v0.1.4
-  [8197267c] IntervalSets v0.7.9
+  [8197267c] IntervalSets v0.7.10
   [92d709cd] IrrationalConstants v0.2.2
   [82899510] IteratorInterfaceExtensions v1.0.0
   [1019f520] JLFzf v0.1.7
   [692b3bcd] JLLWrappers v1.5.0
   [682c06a0] JSON v0.21.4
-  [98e50ef6] JuliaFormatter v1.0.47
+  [98e50ef6] JuliaFormatter v1.0.50
   [ccbc3e58] JumpProcesses v9.10.1
-⌅ [ef3ab10e] KLU v0.4.1
+  [ef3ab10e] KLU v0.5.0
   [63c18a36] KernelAbstractions v0.9.16
   [ba0b0d4f] Krylov v0.9.5
-  [929cbde3] LLVM v6.5.0
+  [929cbde3] LLVM v6.6.0
   [b964fa9f] LaTeXStrings v1.3.1
   [2ee39098] LabelledArrays v1.15.1
   [984bce1d] LambertW v0.4.6
@@ -154,15 +154,15 @@
   [1d6d02ad] LeftChildRightSiblingTrees v0.2.0
   [2d8b4e74] LevyArea v1.0.0
   [d3d80556] LineSearches v7.2.0
-⌃ [7ed4a6bd] LinearSolve v2.22.1
-  [2ab3a3ac] LogExpFunctions v0.3.26
+  [7ed4a6bd] LinearSolve v2.23.4
+  [2ab3a3ac] LogExpFunctions v0.3.27
   [e6f89c97] LoggingExtras v1.0.3
   [bdcacae8] LoopVectorization v0.12.166
   [d8e11817] MLStyle v0.4.17
   [1914dd2f] MacroTools v0.5.13
   [d125e4d3] ManualMemory v0.1.8
   [d0879d2d] MarkdownAST v0.1.2
-  [b8f27783] MathOptInterface v1.25.2
+  [b8f27783] MathOptInterface v1.26.0
   [a3b82374] MatrixFactorizations v2.1.0
   [bb5d69b7] MaybeInplace v0.1.1
   [739be429] MbedTLS v1.1.9
@@ -175,21 +175,21 @@
   [d41bc354] NLSolversBase v7.8.3
   [76087f3c] NLopt v1.0.1
   [2774e3e8] NLsolve v4.5.1
-  [872c559c] NNlib v0.9.11
+  [872c559c] NNlib v0.9.12
   [77ba4419] NaNMath v1.0.2
-  [8913a72c] NonlinearSolve v3.5.4
+  [8913a72c] NonlinearSolve v3.7.1
   [d8793406] ObjectFile v0.4.1
   [6fe1bfb0] OffsetArrays v1.13.0
   [4d8831e6] OpenSSL v1.4.1
   [429524aa] Optim v1.9.2
   [3bd65402] Optimisers v0.3.2
   [7f7a1694] Optimization v3.22.0
   [3e6eede4] OptimizationBBO v0.2.1
-  [fd9f6733] OptimizationMOI v0.3.4
+  [fd9f6733] OptimizationMOI v0.4.0
   [4e6fcdb7] OptimizationNLopt v0.2.0
   [36348300] OptimizationOptimJL v0.2.2
   [bac558e1] OrderedCollections v1.6.3
-  [1dea7af3] OrdinaryDiffEq v6.70.1
+  [1dea7af3] OrdinaryDiffEq v6.71.0
   [90014a1f] PDMats v0.11.31
   [65ce6f38] PackageExtensionCompat v1.0.2
   [d96e819e] Parameters v0.12.3
@@ -209,12 +209,12 @@
   [33c8b6b6] ProgressLogging v0.1.4
   [92933f4c] ProgressMeter v1.9.0
   [1fd47b50] QuadGK v2.9.4
-  [74087812] Random123 v1.6.2
+  [74087812] Random123 v1.7.0
   [e6cf234a] RandomNumbers v1.5.3
   [c1ae055f] RealDot v0.1.0
   [3cdcf5f2] RecipesBase v1.3.4
   [01d81517] RecipesPipeline v0.6.12
-  [731186ca] RecursiveArrayTools v3.8.1
+  [731186ca] RecursiveArrayTools v3.10.0
   [f2c3362d] RecursiveFactorization v0.2.21
   [189a3867] Reexport v1.2.2
   [2792f1a3] RegistryInstances v0.1.0
@@ -226,38 +226,38 @@
   [7e49a35a] RuntimeGeneratedFunctions v0.5.12
   [94e857df] SIMDTypes v0.1.0
   [476501e8] SLEEFPirates v0.6.42
-  [0bca4576] SciMLBase v2.26.0
+  [0bca4576] SciMLBase v2.26.1
   [c0aeaf25] SciMLOperators v0.3.7
   [1ed8b502] SciMLSensitivity v7.55.0
   [6c6a2e73] Scratch v1.2.1
   [efcf1570] Setfield v1.1.1
   [992d4aef] Showoff v1.0.3
   [777ac1f9] SimpleBufferStream v1.1.0
-  [727e6d20] SimpleNonlinearSolve v1.4.1
+  [727e6d20] SimpleNonlinearSolve v1.5.0
   [699a6c99] SimpleTraits v0.9.4
   [ce78b400] SimpleUnPack v1.1.0
   [a2af1166] SortingAlgorithms v1.2.1
-  [47a9eef4] SparseDiffTools v2.16.0
+  [47a9eef4] SparseDiffTools v2.17.0
   [dc90abb0] SparseInverseSubset v0.1.2
   [e56a9233] Sparspak v0.3.9
   [d4ead438] SpatialIndexing v0.1.6
   [276daf66] SpecialFunctions v2.3.1
   [aedffcd0] Static v0.8.10
   [0d7ed370] StaticArrayInterface v1.5.0
-  [90137ffa] StaticArrays v1.9.2
+  [90137ffa] StaticArrays v1.9.3
   [1e83bf80] StaticArraysCore v1.4.2
   [82ae8749] StatsAPI v1.7.0
   [2913bbd2] StatsBase v0.34.2
-  [4c63d2b9] StatsFuns v1.3.0
+  [4c63d2b9] StatsFuns v1.3.1
   [9672c7b4] SteadyStateDiffEq v2.0.1
   [789caeaf] StochasticDiffEq v6.65.0
   [7792a7ef] StrideArraysCore v0.5.2
   [09ab397b] StructArrays v0.6.17
   [53d494c1] StructIO v0.3.0
-  [c3572dad] Sundials v4.23.2
-  [2efcf032] SymbolicIndexingInterface v0.3.6
+  [c3572dad] Sundials v4.24.0
+  [2efcf032] SymbolicIndexingInterface v0.3.7
   [d1185830] SymbolicUtils v1.5.0
-  [0c5d862f] Symbolics v5.17.0
+  [0c5d862f] Symbolics v5.20.1
   [3783bdb8] TableTraits v1.0.1
   [bd369af6] Tables v1.11.1
   [62fd8b95] TensorCore v0.1.1
@@ -283,14 +283,13 @@
   [19fa3120] VertexSafeGraphs v0.2.0
   [e88e6eb3] Zygote v0.6.69
   [700de1a5] ZygoteRules v0.2.5
-  [ae81ac8f] ASL_jll v0.1.3+0
   [6e34b625] Bzip2_jll v1.0.8+1
   [83423d85] Cairo_jll v1.16.1+1
   [cd4c43a9] Dierckx_jll v0.1.0+0
   [7cc45869] Enzyme_jll v0.0.102+0
   [2702e6a9] EpollShim_jll v0.0.20230411+0
   [2e619515] Expat_jll v2.5.0+0
-  [b22a6f82] FFMPEG_jll v4.4.4+1
+⌅ [b22a6f82] FFMPEG_jll v4.4.4+1
   [a3f928ae] Fontconfig_jll v2.13.93+0
   [d7e528f0] FreeType2_jll v2.13.1+0
   [559328eb] FriBidi_jll v1.0.10+0
@@ -302,11 +301,10 @@
   [3b182d85] Graphite2_jll v1.3.14+0
   [2e76f6c2] HarfBuzz_jll v2.8.1+1
   [1d5cc7b8] IntelOpenMP_jll v2024.0.2+0
-⌅ [9cc047cb] Ipopt_jll v300.1400.400+0
   [aacddb02] JpegTurbo_jll v3.0.1+0
   [c1c5ebd0] LAME_jll v3.100.1+0
   [88015f11] LERC_jll v3.0.0+1
-  [dad2f222] LLVMExtra_jll v0.0.28+0
+  [dad2f222] LLVMExtra_jll v0.0.29+0
   [1d63c593] LLVMOpenMP_jll v15.0.7+0
   [dd4b983a] LZO_jll v2.10.1+0
 ⌅ [e9f186c6] Libffi_jll v3.2.2+1
@@ -317,12 +315,9 @@
   [4b2f31a3] Libmount_jll v2.35.0+0
 ⌅ [89763e89] Libtiff_jll v4.5.1+1
   [38a345b3] Libuuid_jll v2.36.0+0
-  [d00139f3] METIS_jll v5.1.2+0
   [856f044c] MKL_jll v2024.0.0+0
-⌅ [d7ed1dd3] MUMPS_seq_jll v5.4.1+0
   [079eb43e] NLopt_jll v2.7.1+0
   [e7412a2a] Ogg_jll v1.3.5+1
-⌅ [656ef2d0] OpenBLAS32_jll v0.3.24+0
   [458c3c95] OpenSSL_jll v3.0.13+0
   [efe28fd5] OpenSpecFun_jll v0.5.5+0
   [91d4177d] Opus_jll v1.3.2+0
@@ -335,7 +330,7 @@
   [2381bf8a] Wayland_protocols_jll v1.31.0+0
   [02c8fc9c] XML2_jll v2.12.2+0
   [aed1982a] XSLT_jll v1.1.34+0
-  [ffd25f8a] XZ_jll v5.4.5+0
+  [ffd25f8a] XZ_jll v5.4.6+0
   [f67eecfb] Xorg_libICE_jll v1.0.10+1
   [c834827a] Xorg_libSM_jll v1.2.3+0
   [4f6342f7] Xorg_libX11_jll v1.8.6+0
@@ -369,7 +364,7 @@
   [2db6ffa8] libevdev_jll v1.11.0+0
   [f638f0a6] libfdk_aac_jll v2.0.2+0
   [36db933b] libinput_jll v1.18.0+0
-  [b53b4c65] libpng_jll v1.6.40+0
+  [b53b4c65] libpng_jll v1.6.42+0
   [f27f6e37] libvorbis_jll v1.3.7+1
   [009596ad] mtdev_jll v1.1.6+0
   [1270edf5] x264_jll v2021.5.5+0
@@ -424,4 +419,4 @@
   [8e850b90] libblastrampoline_jll v5.8.0+1
   [8e850ede] nghttp2_jll v1.52.0+1
   [3f19e933] p7zip_jll v17.4.0+2
-Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`</code></pre></details><p>You can also download the <a href="https://github.com/SciML/DiffEqParamEstim.jl/tree/gh-pages/v2.2.0/assets/Manifest.toml">manifest</a> file and the <a href="https://github.com/SciML/DiffEqParamEstim.jl/tree/gh-pages/v2.2.0/assets/Project.toml">project</a> file.</p></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="getting_started/">Getting Started with Optimization-Based ODE Parameter Estimation »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="auto">Automatic (OS)</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.2.1 on <span class="colophon-date" title="Thursday 15 February 2024 00:48">Thursday 15 February 2024</span>. Using Julia version 1.10.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
+Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`</code></pre></details><p>You can also download the <a href="https://github.com/SciML/DiffEqParamEstim.jl/tree/gh-pages/v2.2.0/assets/Manifest.toml">manifest</a> file and the <a href="https://github.com/SciML/DiffEqParamEstim.jl/tree/gh-pages/v2.2.0/assets/Project.toml">project</a> file.</p></article><nav class="docs-footer"><a class="docs-footer-nextpage" href="getting_started/">Getting Started with Optimization-Based ODE Parameter Estimation »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="auto">Automatic (OS)</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.2.1 on <span class="colophon-date" title="Thursday 22 February 2024 06:16">Thursday 22 February 2024</span>. Using Julia version 1.10.1.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>