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Sage-Bionetworks-IT/packer-shinyserver-pro

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packer-shinyserver-pro

A template to build a Shiny Server Pro with support for R3.6 and R4.0

Note: The files in this template are specifically to build a Ubuntu distribution. You may need to modify it slightly to work with other distros (redhat, aws linux, windows, etc..)

Naming

IMPORTANT: Our naming convention is packer-<image name> (i.e. packer-base-ubuntu-bionic). Please name your repo accordingly. This naming convention helps us locate packer repos and their corresponding builds in github and travis.

Development

Setup

Validate a template

Choose an ImageName such as "my-test-image" and run

cd src
packer validate -var 'ImageName=my-test-image' template.json

AWS Access

To run a build you must have an AWS account and access to EC2.

  • Request an IAM account in Imagecentral
  • Change password and set up MFA
  • Create an Access Key
  • Add your access code and secret key to ~/.aws/credentials, using a profile such as "imagecentral.jsmith"
  • Authenticate with awsmfa, for example awsmfa -i imagecentral.jsmith -t jsmith@imagecentral
  • Finally, get the correct role ARN for the PackerServiceRole then add the following:
[profile packer-service-imagecentral]
region = us-east-1
role_arn = *****
source_profile = jsmith@imagecentral

Now you will be able to build an image and deploy it to Imagecentral.

Manual AMI Build

If you would like to test building an AMI run:

cd src
packer build -var AwsProfile=packer-service-imagecentral -var AwsRegion=us-east-1 -var ImageName=my-test-image -var PACKER_LOG=1 template.json

Packer will do the following:

  • Create a temporary EC2 instance, configure it with shell/ansible/puppet/etc. scripts.
  • Create an AMI from the EC2
  • Delete the EC2

Notes:

  • Packer deploys a new AMI to the AWS account specified by the AwsProfile
  • Subsequent builds may require the -force flag

Image Accessability

This project is setup to build publicly accessible images. To change it to build private images please refer to the packer documentation for ami_users and snapshot_usersoptions.

Testing

As a pre-deployment step we syntatically validate our packer json files with pre-commit.

Please install pre-commit, once installed the file validations will automatically run on every commit. Alternatively you can manually execute the validations by running pre-commit run --all-files.

CI Workflow

The workflow to provision AWS AMI is done using pull requests. Just make changes with PRs and when th PR is merged a packer build will kick off which will build the image and deploys it to AWS.

Packer will do the following:

  • Create a temporary EC2 instance, configure it with shell/ansible/puppet/etc. scripts.
  • Create an AMI from the EC2
  • Delete the EC2

Note: The image will automatically be named gitrepo-branch (i.e. MyRepo-master)

Versioning

Versions are managed by git tags. When a tag is pushed travis will build an AMI for that tag. Tag builds are immutable for downstream dependencies. Once a tag build is generated the AMI for that build will never go away.

Note: The image will automatically be named gitrepo-tag (i.e. MyRepo-v1.0.0)

Searching

List the built images by using the AWS CLI:

aws ec2 describe-images --owners 867686887310 --filters Name=tag:Name,Values=my-test-image

Removal

Building an AMI will create the AMI and one or more snapshots for the AMI. When deleting the AMI remember to also delete its snapshots. Use the provided bash script to remove the AMI and its snapshots.

Contributions

Contributions are welcome.

Requirements:

  • Install pre-commit app
  • Clone this repo
  • Run pre-commit install to install the git hook.

Deployments

Travis runs packer which temporarily deploys an EC2 to create an AMI.

Continuous Integration

We have configured Travis to deploy updates.

Issues

Builds

We use travis CI to automatically build and deploy images. Setup a travis ci build and add the AWS deployment credentials to the travis environment variables.

Secrets

  • We use the AWS SSM to store secrets for this project.

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A template to build an AMI for shinyserver Pro

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